NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37545.1 Public Mus musculus 17 Tff2 23 108 98 CCDS HistoryNCBI Gene:21785Re-query CCDS DB by CCDS ID:37545.1Re-query CCDS DB by GeneID:21785See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37545.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024826.7 ENSMUSP00000024826.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024826.7Link to Ensembl Protein Viewer:ENSMUSP00000024826.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000024826Re-query CCDS DB by Protein ID:ENSMUSP00000024826
Original member Current member NCBI NM_009363.3 NP_033389.2 Accepted alive Link to Nucleotide Sequence:NM_009363.3Link to Protein Sequence:NP_033389.2Re-query CCDS DB by Nucleotide ID:NM_009363Re-query CCDS DB by Protein ID:NP_033389Link to BLAST:NP_033389.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033389.2 129 Q03404 129 99.2248% 0 1

Chromosomal Locations for CCDS 37545.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 31141209 31141222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31142202 31142348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31143114 31143263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31144170 31144248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGCGACCTCGAGGTGCCCCCCTGCTGGCAGTGGTCCTGGTTTTGGGACTGCATGCTCTGGTAGAGGGCG
AGAAACCTTCCCCCTGTCGGTGCTCCAGGCTGACACCCCACAACAGAAAGAACTGTGGCTTCCCGGGCAT
CACCAGTGAGCAGTGCTTTGATCTTGGATGCTGCTTTGACTCTAGCGTCGCTGGGGTCCCTTGGTGTTTC
CACCCACTTCCAAACCAAGAATCGGAGCAGTGTGTCATGGAAGTGTCAGCTCGCAAGAATTGTGGGTACC
CGGGCATCAGTCCCGAGGACTGTGCCAGTCGAAACTGCTGCTTTTCCAACCTGATCTTTGAAGTGCCCTG
GTGTTTCTTCCCACAGTCTGTGGAAGATTGTCACTACTGA

Translation (129 aa):
MRPRGAPLLAVVLVLGLHALVEGEKPSPCRCSRLTPHNRKNCGFPGITSEQCFDLGCCFDSSVAGVPWCF
HPLPNQESEQCVMEVSARKNCGYPGISPEDCASRNCCFSNLIFEVPWCFFPQSVEDCHY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH