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Report for CCDS27698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27698.1 Public Mus musculus 15 Cyb5r3 23 108 98 CCDS HistoryNCBI Gene:109754Re-query CCDS DB by CCDS ID:27698.1Re-query CCDS DB by GeneID:109754See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27698.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018186.15 ENSMUSP00000018186.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018186.15Link to Ensembl Protein Viewer:ENSMUSP00000018186.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000018186Re-query CCDS DB by Protein ID:ENSMUSP00000018186
Original member Current member NCBI NM_029787.3 NP_084063.1 Accepted alive Link to Nucleotide Sequence:NM_029787.3Link to Protein Sequence:NP_084063.1Re-query CCDS DB by Nucleotide ID:NM_029787Re-query CCDS DB by Protein ID:NP_084063Link to BLAST:NP_084063.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084063.1 301 Q9DCN2-1 301 100% 0 0

Chromosomal Locations for CCDS 27698.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 83154550 83154722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83158826 83158925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83160104 83160189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83160338 83160421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83160821 83160950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83161850 83161956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83162232 83162304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83166075 83166206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83172112 83172132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGGGGGCCCAGCTGAGCACGTTGAGCCACGTGGTGCTCTCGCCCGTCTGGTTCATCTACAGTCTCTTCA
TG
AAGCTGTTTCAGCGCTCCACACCGGCCATCACCCTCGAGAACCCCGACATCAAGTACCCTCTGAGGCT
C
ATCGACAAGGAGGTCATCAGTCCTGACACTCGGCGCTTCCGATTTGCCCTCCCTTCACCCCAGCACATC
CTG
GGCCTTCCTATTGGCCAACACATCTACCTCTCGACTAGGATCGATGGCAACTTGGTCATTCGGCCCT
AC
ACCCCTGTGTCGAGCGATGATGACAAGGGCTTTGTGGACTTGGTGGTCAAGGTTTACTTCAAGGACAC
C
CATCCCAAGTTTCCAGCTGGAGGGAAAATGTCTCAGTACCTGGAAAACATGAAGATTGGAGACACCATT
GAA
TTCCGGGGTCCCAATGGGCTACTGGTCTACCAGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGA
AG
TCCAACCCCGTTGTCAGGACGGTGAAGTCTGTAGGCATGATTGCAGGAGGGACAGGCATCACCCCAAT
G
CTGCAGGTGATCCGAGCCGTCCTGAAGGACCCAAACGACCACACCGTGTGCTATCTGCTCTTTGCCAAC
CAG
TCCGAGAAAGATATCCTGTTGCGGCCTGAGCTGGAGGAACTGAGGAACGAACATTCTGCTCGCTTCA
AG
CTCTGGTACACAGTGGACAAAGCCCCTGATGCCTGGGACTATAGCCAGGGCTTCGTGAATGAGGAGAT
G
ATCAGGGACCACCTTCCAACTCCTGGGGAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATC
CAG
TTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCATCCCAAGGAGCGATGCTTCACCTTCTGA


Translation (301 aa):
MGAQLSTLSHVVLSPVWFIYSLFMKLFQRSTPAITLENPDIKYPLRLIDKEVISPDTRRFRFALPSPQHI
L
GLPI
GQHIYLSTRIDGNLVIRPYTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTI
E
FRGPNGLLVYQGK
GKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFAN
Q
SEKDILLRPELEELRNEHSARFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPTPGEEPLILMCGPPPMI
Q
FACLPNLERVGHPKERCFTF




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser