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Report for CCDS21745.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21745.1 Public Mus musculus 7 Adm 23 108 98 CCDS HistoryNCBI Gene:11535Re-query CCDS DB by CCDS ID:21745.1Re-query CCDS DB by GeneID:11535See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21745.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033054.9 ENSMUSP00000033054.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033054.9Link to Ensembl Protein Viewer:ENSMUSP00000033054.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000033054Re-query CCDS DB by Protein ID:ENSMUSP00000033054
Original member Current member NCBI NM_009627.2 NP_033757.1 Accepted alive Link to Nucleotide Sequence:NM_009627.2Link to Protein Sequence:NP_033757.1Re-query CCDS DB by Nucleotide ID:NM_009627Re-query CCDS DB by Protein ID:NP_033757Link to BLAST:NP_033757.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033757.1 184 P97297 184 100% 0 0

Chromosomal Locations for CCDS 21745.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 110628279 110628376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 110628525 110628674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 110628862 110629168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGAAGCTGGTTTCCATCACCCTGATGTTATTGGGTTCACTCGCTTTCCTAGGCGCGGACACTGCAGGGC
CAGATACTCCTTCGCAGTTCCGAAAGAAGTGGAATAAGTGGGCGCTAAGTCGTGGGAAGAGGGAACTACA
AGCATCCAGCAGCTACCCTACGGGACTCGCTGATGAGACGACAGTTCCTACCCAGACTCTTGATCCATTC
CTGGACGAGCAGAACACAACTGGCCCCCTACAAGCCAGCAATCAGAGCGAAGCCCACATTCGTGTCAAAC
GCTACCGCCAGAGCATGAACCAGGGTTCCCGCAGCAATGGATGCCGCTTCGGGACCTGCACATTTCAGAA
ATTGGCCCACCAGATCTACCAGCTAACAGACAAAGACAAGGACGGCATGGCTCCCAGAAACAAGATCAGC
CCTCAAGGCTATGGCCGCCGGCGCCGGCGTTCCCTGCTGGAGGTCCTCCGGTCCCGGACTGTGGAGTCCT
CCCAGGAGCAGACACACACAGCCCCAGGCCCCTGGGCGCACATCTCCAGACTCTTTAGGATATAG

Translation (184 aa):
MKLVSITLMLLGSLAFLGADTAGPDTPSQFRKKWNKWALSRGKRELQASSSYPTGLADETTVPTQTLDPF
LDEQNTTGPLQASNQSEAHIRVKRYRQSMNQGSRSNGCRFGTCTFQKLAHQIYQLTDKDKDGMAPRNKIS
PQGYGRRRRRSLLEVLRSRTVESSQEQTHTAPGPWAHISRLFRI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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