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Report for CCDS14868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14868.1 Public Mus musculus 1 Prss39 23 108 98 CCDS HistoryNCBI Gene:21755Re-query CCDS DB by CCDS ID:14868.1Re-query CCDS DB by GeneID:21755See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027299.9 ENSMUSP00000027299.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027299.9Link to Ensembl Protein Viewer:ENSMUSP00000027299.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000027299Re-query CCDS DB by Protein ID:ENSMUSP00000027299
Original member Current member NCBI NM_009355.3 NP_033381.1 Accepted alive Link to Nucleotide Sequence:NM_009355.3Link to Protein Sequence:NP_033381.1Re-query CCDS DB by Nucleotide ID:NM_009355Re-query CCDS DB by Protein ID:NP_033381Link to BLAST:NP_033381.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033381.1 367 O70169 367 100% 0 0

Chromosomal Locations for CCDS 14868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 34498457 34498628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34499228 34499390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34500016 34500290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34502027 34502196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34502624 34502947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGTGGGGTTCCAGGGCCCAACAATCAGGTCCGGACAGGGGCGGAGCCTGCCTGCTGGCTGCTTTCTTAC
TCTGTTTCAGCCTCTTACATGCTCAGGACTACACGCCCTCACAAACACCTCCACCCACATCGAACACCTC
GCTCAAACCAAGAGGCCGGGTCCAGAAGGAGTTATGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGC
GGTCAGATTGCAAAGGCTGAGCGGTGGCCGTGGCAGGCCAGTCTGATCTTTCGTGGCAGGCACATCTGTG
GAGCAGTTCTCATCGACAAAACCTGGCTACTCAGCGCTGCCCACTGCTTCCAAAGGTCTCTCACACCATC
TGACTACCGGATCCTGCTAGGGTACAACCAGCTGAGCAACCCCTCCAACTACAGCCGGCAGATGACCGTG
AACAAGGTCATCTTGCATGAGGACTATAGCAAGCTCAGCCGTCTGGAGAAGAACATTGTCCTGATCCAGC
TGCACCACCCTGTGATCTACAGCACCCACATTTTCCCAGCCTGTGTCCCTGACGGCACCACGAAGGTTTC
CCCTAATAATCTCTGCTGGATAAGCGGCTGGGGAATGCTCTCAGCGGACAAGTTCCTGCAAGCACCTTTC
CCTCTGCTGGACGCGGAGGTCTCTCTTATTGATGAAGAGGAATGCACGACCTTTTTCCAGACACCAGAAG
TCAGCATCACGGAATATGATGTTATAAAAGACGATGTGTTATGTGCCGGAGATCTCACCAATCAGAAATC
CTCCTGCCGAGGAGACTCTGGGGGCCCCCTGGTCTGCTTCCTGAATAGCTTCTGGTACGTGGTAGGGCTG
GCCAACTGGAATGGAGCATGTCTTGAACCGATCCACAGCCCCAACATCTTCACCAAGGTCTCCTACTTTT
CTGACTGGATCAAGCAGAAAAAGGCAAACACGCCTGCCGCTGATGTCTCCTCAGCACCCCTTGAGGAAAT
GGCGTCATCCCTGAGAGGCTGGGGGAATTACAGTGCAGGCATTACCCTCAAACCCAGGATCTCCACAACC
TTGCTGTCTTCTCAGGCCCTCCTCCTGCAATCGATTTGGCTCAGGATTCTGTGA

Translation (367 aa):
MWGSRAQQSGPDRGGACLLAAFLLCFSLLHAQDYTPSQTPPPTSNTSLKPRGRVQKELCGKTKFQGKIYG
GQIAKAERWPWQASLIFRGRHICGAVLIDKTWLLSAAHCFQRSLTPSDYRILLGYNQLSNPSNYSRQMTV
NKVILHEDYSKLSRLEKNIVLIQLHHPVIYSTHIFPACVPDGTTKVSPNNLCWISGWGMLSADKFLQAPF
PLLDAEVSLIDEEECTTFFQTPEVSITEYDVIKDDVLCAGDLTNQKSSCRGDSGGPLVCFLNSFWYVVGL
ANWNGACLEPIHSPNIFTKVSYFSDWIKQKKANTPAADVSSAPLEEMASSLRGWGNYSAGITLKPRISTT
LLSSQALLLQSIWLRIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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