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Report for CCDS26384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26384.1 Public Mus musculus 13 Gpld1 23 108 98 CCDS HistoryNCBI Gene:14756Re-query CCDS DB by CCDS ID:26384.1Re-query CCDS DB by GeneID:14756See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26384.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021773.12 ENSMUSP00000021773.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021773.12Link to Ensembl Protein Viewer:ENSMUSP00000021773.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000021773Re-query CCDS DB by Protein ID:ENSMUSP00000021773
Original member Current member NCBI NM_008156.2 NP_032182.2 Accepted alive Link to Nucleotide Sequence:NM_008156.2Link to Protein Sequence:NP_032182.2Re-query CCDS DB by Nucleotide ID:NM_008156Re-query CCDS DB by Protein ID:NP_032182Link to BLAST:NP_032182.2

Chromosomal Locations for CCDS 26384.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 24943617 24943713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24948087 24948142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24952854 24952932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24955115 24955212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24956052 24956162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24957515 24957563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24958910 24958964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24962320 24962427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24962627 24962654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24962738 24962877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24966638 24966700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24968311 24968434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24971392 24971531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24975599 24975785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24979379 24979489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24979672 24979746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24979838 24979994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24980957 24981098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24982508 24982616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24982698 24982791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24984028 24984207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24984708 24984868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24986892 24986918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24987009 24987059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 24990036 24990122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2529 nt):
ATGTCTGCAGGCAGGCTGTGGTCTAGCCTGCTGCTTCTGCTGCCTCTTTTCTGCTCTAAAAGCTCATCTT
GTGGTCTCTCAACACATGTAGAAATAGGACACAGGGCTCTGGAGTTTCTTCGGCTTCAAGATGGACGCAT
TAACTACAAAGAGCTGATCTTAGAGCACCAGGACGCATATCAGGCTGGGACCGTGTTTCCTGATGCCTTT
TATCCTAGCATCTGCAAAAGAGGAAAATATCATGACGTTTCTGAGAGGACTCACTGGACTCCATTTCTTA
ACGCCAGCATCCATTATATTCGAGAGAACTACCCTCTGCCCTGGGAGAAGGACACAGAGAAGTTGGTGGC
TTTCTTGTTTGGAATCACCTCCCACATGGTCGCTGACGTGAGCTGGCATAGCCTGGGTATTGAACAAGGG
TTCCTCAGGACAATGGGAGCTATCGATTTTTACAACTCTTACTCTGACGCTCACTCGGCTGGTGATTTTG
GAGGAGATGTGTTGAGCCAGTTTGAATTTAATTTTAATTACCTCTCACGGCGCTGGTACGTGCCCGTCAG
GGATCTTCTGAGAATTTATGATAATCTCTATGGTCGGAAAGTCATCACCAAAGACGTCCTTGTTGATTGC
ACCTACCTTCAGTTCCTGGAAATGCACGGGGAGATGTTTGCTGTTTCCAAGCTCTATTCCACGTACTCTA
CAAAGTCCCCATTTCTGGTGGAGCAGTTCCAAGACTATTTCCTCGGAGGTCTGGATGACATGGCATTCTG
GTCCACGAACATTTACCGTTTGACCAGCTTTATGCTGGAGAACGGGACCAGTGACTGCAACCTGCCTGAG
AACCCCCTGTTCATCTCCTGTGATGGCAGGAACCACACCCTCAGTGGCTCAAAAGTGCAGAAAAATGATT
TTCACAGGAATTTGACCATGTTCATAAGTAGAGACATCAGGAAAAACCTCAATTACACAGAAAGAGGCGT
GTTCTACAGCACAGGCTCCTGGGCCCCGGAATCTGTCACCTTTATGTACCAGACTCTGGAGAGGAACCTG
AGGCTGATGCTTGCTGGCAGCTCTCAGAAAAATCTGAATCATGTCTCCAGCCCCTCTGCCTCCTACACCC
TGTCTGTCCCCTATGCCAGGCTCGGCTGGGTCATGACCTCAGCTGACCTCAACCAGGATGGGCACGGAGA
CCTCGTGGTGGGTGCACCAGGCTACAGCCACCCTGGCCGCTTCCAGATTGGGCGGGTGTACATCATCTAT
GGCAACGATCTGGGCCTGCCTCCCATCGACCTGGACTTAGACAAGGAGGCCCATGGGATCCTGGAGGGCT
TCCAGCCTTCAGGTCGCTTTGGCTCAGCTTTGGCCGTGCTGGACTTCAACCAGGATGGGCTGCCTGACCT
GGCTGTGGGCGCTCCCTCCGTGGGCTCAGGGCAGCTCACCTACAATGGCTCGGTGTATGTCTACTATGGT
TCCCAGCAAGGGAGGCTGTCTTCTTCCCCTAACGTCACCATCTCCTGCAAGGACACCTACTGTAACTTGG
GCTGGACCCTCTTGGCAACAGATGCAGACGGAGATGGCCGGCACGATCTGGTCATCAGCTCCCCTTTCGC
ACCAGGTGGAGGGAAGCAGAGAGGAATTGTGGCCACCTTTTATTCTCACCCCAGACGGAATGACAAAGAA
TTACTGACTTTGGAGGAAGCTGACTGGAAGGTGAATGGGGAGGAGGACTTCTCGTGGTTTGGATACTCCC
TTCACGGGGTCACAGTGGCAAACAGAAGCCTGCTGCTGATTGGGAGCCCGACCTGGAAGAATGTCAGCAG
GATGGCACGCTCAAGCCACAAAAAGAACCAAGAGGAAAAGAGCCTGGGAAAGGTGTACGGCTACTTTCTC
CCGAACCGCCAGAGCACAATCACTATCTCGGGAGATAAGGCGATGGGAAAGCTGGGTACCTCCCTGTCCA
GTGGTTATGTGAGAGTGAATGGGACCCTAACCCAAGTCCTGCTGGTTGGAGCCCCTACTCATGATGACGT
GTCTAAAATGGCATTCCTAACCATGACCCTGCACCAGGGTGGAGCCACTCGGATGTACGAACTAGCTCCC
GAGAAGACACAGCCTGCTCTGCTCAGCACATTCAGTGGAGACCGACGCTTTTCTCGATTTGGTAGTGTTC
TGCACCTGACTGACCTGGATGATGATGGCTTAGATGAAATCATCATGGCTGCCCCACTGAGGATAACAGA
TGTCACTTCCGGACTGCTAGGGGGAGAAGATGGGCGAGTGTACATTTATAATGGCATGTATACCACCTTA
GGTGACATGACCGGCAAATGCAAGTCCTGGATGACTCCATGTCCGGAGGAGAAGGCACAGTATGTACTAA
CTTCTCCAGAGGCAAGTTCAAGGTTTGGGAGCTCGCTGGTGTCCGTGCGGTCTAAGGGAAGGAACCAAGT
GGTTGTTGCTGCTGGAAGGAGTTCTTGGGGAGCCCGGCTCTCTGGGGCACTTCATGTCTACAGCTTCAGC
TCAGACTAA

Translation (842 aa):
MSAGRLWSSLLLLLPLFCSKSSSCGLSTHVEIGHRALEFLRLQDGRINYKELILEHQDAYQAGTVFPDAF
YPSICKRGKYHDVSERTHWTPFLNASIHYIRENYPLPWEKDTEKLVAFLFGITSHMVADVSWHSLGIEQG
FLRTMGAIDFYNSYSDAHSAGDFGGDVLSQFEFNFNYLSRRWYVPVRDLLRIYDNLYGRKVITKDVLVDC
TYLQFLEMHGEMFAVSKLYSTYSTKSPFLVEQFQDYFLGGLDDMAFWSTNIYRLTSFMLENGTSDCNLPE
NPLFISCDGRNHTLSGSKVQKNDFHRNLTMFISRDIRKNLNYTERGVFYSTGSWAPESVTFMYQTLERNL
RLMLAGSSQKNLNHVSSPSASYTLSVPYARLGWVMTSADLNQDGHGDLVVGAPGYSHPGRFQIGRVYIIY
GNDLGLPPIDLDLDKEAHGILEGFQPSGRFGSALAVLDFNQDGLPDLAVGAPSVGSGQLTYNGSVYVYYG
SQQGRLSSSPNVTISCKDTYCNLGWTLLATDADGDGRHDLVISSPFAPGGGKQRGIVATFYSHPRRNDKE
LLTLEEADWKVNGEEDFSWFGYSLHGVTVANRSLLLIGSPTWKNVSRMARSSHKKNQEEKSLGKVYGYFL
PNRQSTITISGDKAMGKLGTSLSSGYVRVNGTLTQVLLVGAPTHDDVSKMAFLTMTLHQGGATRMYELAP
EKTQPALLSTFSGDRRFSRFGSVLHLTDLDDDGLDEIIMAAPLRITDVTSGLLGGEDGRVYIYNGMYTTL
GDMTGKCKSWMTPCPEEKAQYVLTSPEASSRFGSSLVSVRSKGRNQVVVAAGRSSWGARLSGALHVYSFS
SD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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