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Report for CCDS28395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28395.1 Public Mus musculus 17 Mrgprh 23 108 98 CCDS HistoryNCBI Gene:80978Re-query CCDS DB by CCDS ID:28395.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 28395.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075296.3 ENSMUSP00000074768.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075296.3Link to Ensembl Protein Viewer:ENSMUSP00000074768.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000075296Re-query CCDS DB by Protein ID:ENSMUSP00000074768
Original member Current member NCBI NM_030726.1 NP_109651.1 Accepted alive Link to Nucleotide Sequence:NM_030726.1Link to Protein Sequence:NP_109651.1Re-query CCDS DB by Nucleotide ID:NM_030726Re-query CCDS DB by Protein ID:NP_109651Link to BLAST:NP_109651.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_109651.1 321 Q99MT8 321 100% 0 0

Chromosomal Locations for CCDS 28395.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 12876875 12877840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGGAGCCATTGGCAATGACCTTGTATCCTCTGGAATCCACACAACCCACCAGAAACAAAACCCCAAATG
AAACCACCTGGTCTTCAGAGCATACGGATGACCACACTTACTTCTTAGTCTCCCTGGTCATTTGTTCCCT
GGGACTGGCTGGGAATGGCCTTTTGATATGGTTCCTAATCTTCTGTATCAAGAGGAAGCCATTCACCATC
TACATCCTCCATCTCGCCATTGCAGACTTCATGGTCCTCCTCTGTTCGTCCATCATGAAGCTAGTGAACA
CTTTTCACATCTACAATATGACCTTAGAGAGCTACGCCATCCTCTTCATGATCTTTGGCTACAACACAGG
GCTCCACCTCCTCACGGCCATCAGCGTAGAGCGGTGCCTCTCCGTGCTTTATCCAATCTGGTACCAGTGC
CAACGCCCAAAACACCAGTCCGCTGTGGCCTGTATGCTGCTGTGGGCCCTCTCTGTTCTCGTGTCTGGTT
TGGAAAACTTCTTCTGCATTCTGGAAGTGAAGCCCCAATTCCCAGAATGCCGATACGTGTACATATTCTC
CTGTATCTTGACTTTCCTGGTCTTCGTTCCTCTCATGATCTTCTCTAATTTGATCCTCTTCATCCAAGTC
TGCTGTAACCTGAAGCCACGTCAACCGACCAAGCTCTATGTGATCATCATGACCACGGTCATCCTGTTTC
TTGTCTTCGCCATGCCCATGAAGGTGTTGCTTATCATCGGCTACTATTCTAGTTCTCTTGATGATTCTGT
ATGGGACTCCCTCCCCTACCTGAACATGCTGTCCACTATAAACTGCAGCATCAACCCAATTGTCTACTTT
GTGGTAGGCAGCCTGAGGAGGAAGAGGAGTAGGAAGTCCCTAAAAGAAGCACTGCAGAAAGTCTTCGAGG
AAAAGCCAGTGGTGGCCTCGAGGGAGAATGTGACACAGTTCTCGCTGCCTTCATGA

Translation (321 aa):
MEPLAMTLYPLESTQPTRNKTPNETTWSSEHTDDHTYFLVSLVICSLGLAGNGLLIWFLIFCIKRKPFTI
YILHLAIADFMVLLCSSIMKLVNTFHIYNMTLESYAILFMIFGYNTGLHLLTAISVERCLSVLYPIWYQC
QRPKHQSAVACMLLWALSVLVSGLENFFCILEVKPQFPECRYVYIFSCILTFLVFVPLMIFSNLILFIQV
CCNLKPRQPTKLYVIIMTTVILFLVFAMPMKVLLIIGYYSSSLDDSVWDSLPYLNMLSTINCSINPIVYF
VVGSLRRKRSRKSLKEALQKVFEEKPVVASRENVTQFSLPS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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