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Report for CCDS4711.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4711.1 Public Homo sapiens 6 GPANK1 24 110 108 CCDS HistoryNCBI Gene:7918Re-query CCDS DB by CCDS ID:4711.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4711.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375893.6 ENSP00000365057.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375893.6Link to Ensembl Protein Viewer:ENSP00000365057.2Re-query CCDS DB by Nucleotide ID:ENST00000375893Re-query CCDS DB by Protein ID:ENSP00000365057
Original member Current member EBI ENST00000375895.6 ENSP00000365059.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375895.6Link to Ensembl Protein Viewer:ENSP00000365059.2Re-query CCDS DB by Nucleotide ID:ENST00000375895Re-query CCDS DB by Protein ID:ENSP00000365059
Original member Current member EBI ENST00000375896.9 ENSP00000365060.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375896.9Link to Ensembl Protein Viewer:ENSP00000365060.4Re-query CCDS DB by Nucleotide ID:ENST00000375896Re-query CCDS DB by Protein ID:ENSP00000365060
Original member Current member EBI ENST00000375900.8 ENSP00000365065.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375900.8Link to Ensembl Protein Viewer:ENSP00000365065.4Re-query CCDS DB by Nucleotide ID:ENST00000375900Re-query CCDS DB by Protein ID:ENSP00000365065
Original member Current member EBI ENST00000375906.5 ENSP00000365071.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375906.5Link to Ensembl Protein Viewer:ENSP00000365071.1Re-query CCDS DB by Nucleotide ID:ENST00000375906Re-query CCDS DB by Protein ID:ENSP00000365071
Original member Current member NCBI NM_001199237.1 NP_001186166.1 Accepted alive Link to Nucleotide Sequence:NM_001199237.1Link to Protein Sequence:NP_001186166.1Re-query CCDS DB by Nucleotide ID:NM_001199237Re-query CCDS DB by Protein ID:NP_001186166Link to BLAST:NP_001186166.1
Original member Current member NCBI NM_001199238.1 NP_001186167.1 Accepted alive Link to Nucleotide Sequence:NM_001199238.1Link to Protein Sequence:NP_001186167.1Re-query CCDS DB by Nucleotide ID:NM_001199238Re-query CCDS DB by Protein ID:NP_001186167Link to BLAST:NP_001186167.1
Original member Current member NCBI NM_001199239.1 NP_001186168.1 Accepted alive Link to Nucleotide Sequence:NM_001199239.1Link to Protein Sequence:NP_001186168.1Re-query CCDS DB by Nucleotide ID:NM_001199239Re-query CCDS DB by Protein ID:NP_001186168Link to BLAST:NP_001186168.1
Original member Current member NCBI NM_001199240.1 NP_001186169.1 Accepted alive Link to Nucleotide Sequence:NM_001199240.1Link to Protein Sequence:NP_001186169.1Re-query CCDS DB by Nucleotide ID:NM_001199240Re-query CCDS DB by Protein ID:NP_001186169Link to BLAST:NP_001186169.1
Original member Current member NCBI NM_033177.4 NP_149417.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033177.4Link to Protein Sequence:NP_149417.1Re-query CCDS DB by Nucleotide ID:NM_033177Re-query CCDS DB by Protein ID:NP_149417Link to BLAST:NP_149417.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186166.1 356 O95872 356 100% 0 0
NP_001186167.1 356 O95872 356 100% 0 0
NP_001186168.1 356 O95872 356 100% 0 0
NP_001186169.1 356 O95872 356 100% 0 0
NP_149417.1 356 O95872 356 100% 0 0

Chromosomal Locations for CCDS 4711.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31662266 31662710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31663853 31664478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGTCCCGGCCCTTGCTCATCACCTTCACCCCAGCCACTGACCCCAGCGACCTCTGGAAGGATGGGCAGC
AGCAGCCACAGCCCGAGAAGCCAGAGTCCACCCTGGATGGGGCTGCAGCCCGAGCTTTCTATGAGGCCCT
GATTGGGGATGAGAGCAGCGCTCCTGACTCCCAGAGATCTCAGACTGAACCTGCCAGAGAAAGAAAGAGA
AAGAAAAGAAGAATAATGAAGGCACCAGCAGCAGAAGCAGTGGCAGAAGGAGCATCAGGAAGACATGGAC
AAGGGAGATCCCTTGAGGCTGAGGATAAGATGACTCACCGGATACTGAGGGCAGCCCAGGAGGGGGACCT
GCCAGAACTTAGGAGACTGCTGGAACCGCATGAGGCAGGAGGAGCTGGGGGGAATATCAACGCCCGGGAT
GCCTTCTGGTGGACCCCACTGATGTGTGCTGCTCGAGCGGGCCAGGGGGCAGCTGTGAGCTATCTCCTGG
GCCGTGGGGCTGCCTGGGTGGGGGTCTGTGAGCTGAGTGGCAGGGATGCGGCTCAGCTCGCTGAAGAAGC
TGGCTTCCCTGAGGTAGCCCGCATGGTCAGGGAGAGCCATGGAGAGACAAGGAGCCCGGAAAACCGGTCT
CCTACTCCCTCCCTCCAGTACTGCGAGAACTGTGACACCCACTTCCAAGATTCCAACCACCGCACATCCA
CTGCTCACCTGCTGTCACTGTCGCAGGGTCCTCAGCCTCCCAACCTTCCACTTGGGGTGCCCATCTCCAG
CCCGGGCTTCAAACTGCTGCTGAGGGGGGGCTGGGAGCCAGGAATGGGGCTGGGACCCCGGGGTGAGGGC
CGTGCCAATCCCATCCCCACTGTCCTCAAGAGGGACCAGGAAGGACTAGGCTACAGATCAGCACCCCAGC
CCCGAGTGACACATTTCCCAGCTTGGGATACCCGAGCTGTGGCTGGGAGGGAGAGACCCCCTCGGGTGGC
CACACTGAGCTGGAGGGAGGAGAGAAGGAGGGAGGAGAAAGACAGGGCTTGGGAGCGGGATCTAAGGACT
TACATGAACCTCGAGTTCTGA

Translation (356 aa):
MSRPLLITFTPATDPSDLWKDGQQQPQPEKPESTLDGAAARAFYEALIGDESSAPDSQRSQTEPARERKR
KKRRIMKAPAAEAVAEGASGRHGQGRSLEAEDKMTHRILRAAQEGDLPELRRLLEPHEAGGAGGNINARD
AFWWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDAAQLAEEAGFPEVARMVRESHGETRSPENRS
PTPSLQYCENCDTHFQDSNHRTSTAHLLSLSQGPQPPNLPLGVPISSPGFKLLLRGGWEPGMGLGPRGEG
RANPIPTVLKRDQEGLGYRSAPQPRVTHFPAWDTRAVAGRERPPRVATLSWREERRREEKDRAWERDLRT
YMNLEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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