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Report for CCDS16099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16099.1 Public Mus musculus 2 Phospho2 23 108 98 CCDS HistoryNCBI Gene:73373Re-query CCDS DB by CCDS ID:16099.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028494.8 ENSMUSP00000028494.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028494.8Link to Ensembl Protein Viewer:ENSMUSP00000028494.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000028494Re-query CCDS DB by Protein ID:ENSMUSP00000028494
Original member Current member EBI ENSMUST00000112266.7 ENSMUSP00000107885.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112266.7Link to Ensembl Protein Viewer:ENSMUSP00000107885.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112266Re-query CCDS DB by Protein ID:ENSMUSP00000107885
Original member Current member EBI ENSMUST00000180290.1 ENSMUSP00000136471.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180290.1Link to Ensembl Protein Viewer:ENSMUSP00000136471.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180290Re-query CCDS DB by Protein ID:ENSMUSP00000136471
Original member Current member NCBI NM_028521.2 NP_082797.1 Accepted alive Link to Nucleotide Sequence:NM_028521.2Link to Protein Sequence:NP_082797.1Re-query CCDS DB by Nucleotide ID:NM_028521Re-query CCDS DB by Protein ID:NP_082797Link to BLAST:NP_082797.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082797.1 241 Q9D9M5 241 100% 0 0

Chromosomal Locations for CCDS 16099.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 69795502 69796227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGAAAGTTCTGTTGGTGTTTGACTTTGACAATACAATCATAGACGACAACAGTGACACCTGGATTGTAC
AGTGTGCTCCAGACAAAAAGCTTCCCATTGAGCTACAAGATTCTTATCAAAAGGGGCTTTGGACAGAATT
TATGGGCAGAGTCTTTAAATATTTGAGAGATGAGGGGGTAAAAGCAGATGAACTGAAGAGGGCAGTGACT
TCACTGCCCTTCACCTCAGGGATGATAGAACTTCTCAGCTTCCTGAGGATGAATAAGGACAGATTTGACT
GCATCATCATTTCGGATTCAAATTCCATCTTCATAGACTGGGTTCTAGAAGCTGCTGCCTTTCACGATGT
CTTTGATCACGTGTTTACCAATCCAGCATCCTTTGATAGCAGTGGTCGTCTCACAGTGAAAAATTACCAT
GCTCATTCTTGCACTAGGTGCCCAAAGAATCTTTGCAAAAATACAGTTTTGGGAGAATTTATAGATAAAC
AGTTACAAAAGGGCGTGAGATATACACGGATTGTTTATATAGGTGATGGTGGAAATGATGTCTGCCCAGT
AACTTTTTTAAAGAAAAATGATGTTGCCATGCCACGGGAAGGATATACTTTACATAGAACTCTTGCCAAA
ATGTCTCAAAATCTTGAGCCTATGGAATCTTCTATTGTAGTTTGGTCTTCAGGTGTTGAAATAATTTCTC
ATTTACAATTTCTAATAAAGATGTGA

Translation (241 aa):
MKVLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKADELKRAVT
SLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDHVFTNPASFDSSGRLTVKNYH
AHSCTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYIGDGGNDVCPVTFLKKNDVAMPREGYTLHRTLAK
MSQNLEPMESSIVVWSSGVEIISHLQFLIKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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