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Report for CCDS15690.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15690.1 Public Mus musculus 2 Mindy3 23 108 98 CCDS HistoryNCBI Gene:66960Re-query CCDS DB by CCDS ID:15690.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15690.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028105.12 ENSMUSP00000028105.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028105.12Link to Ensembl Protein Viewer:ENSMUSP00000028105.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028105Re-query CCDS DB by Protein ID:ENSMUSP00000028105
Original member Current member NCBI NM_024185.4 NP_077147.2 Accepted alive Link to Nucleotide Sequence:NM_024185.4Link to Protein Sequence:NP_077147.2Re-query CCDS DB by Nucleotide ID:NM_024185Re-query CCDS DB by Protein ID:NP_077147Link to BLAST:NP_077147.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077147.2 444 Q9CV28-1 444 100% 0 0

Chromosomal Locations for CCDS 15690.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 12348054 12348203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12350929 12351000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12355277 12355364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12356905 12356977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12364447 12364519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12382103 12382183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12386609 12386679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12396179 12396258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12397493 12397566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12400023 12400137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12401025 12401076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12403998 12404168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12405860 12405920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12410001 12410080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12419159 12419252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGTCCGAAGTGACCAAAGAGCTGCTGGAGCTGGTGTGGGGCACCAAGAGCAGTCCCGGACTGTCGGACA
CCATCTTCTGCCGCTGGACGCAAGGGTTTGTGTTTAGTGAATCAGAGGGATCTGCATTAGAGCAGTTTGA
AGGTGGCCCCTGTGCTGTTATTGCACCTGTCCAGGCGTTTCTTTTGAAGAAGCTTCTGTTCTCCTCCGAG
AAGTCGTCCTGGCGGGATTGCTCAGAGGAAGAGCAGAAGGAGCTCCTTTGTCACACCTTGTGTGATATTG
TAGAGAGTGCTTATGACAGCTCTGGATCATACTGCTTGGTTTCATGGTTGAGAGGAAGGACCCCCGAGGA
AGCGGCTAGGATTTCTGGGAGTCCTGCACAGTCTAGTTGCCAAGTGGAACATTCTTCTGCCTTGGCTGTC
GAAGAGCTTGGCTTTGAGCGATTTCATGCATTAATTCAAAAAAGATCATTCAGAACTGTATCAGAATTAA
AAGATGCTGTCTTGGACCAGTATTCAATGTGGGGAAACAAATTTGGAGTCTTGCTTTTTCTCTATTCTGT
ATTACTGACAAAGGGCATTGAAAACATAAAGAATTCAATTGAAGATGCAAATGAGCCTTTGATAGACCCT
GTGTACGGGCATGGCAGCCAAAGCTTAATTAACCTCCTACTGACGGGGCATGCAGTATCTAATGTATGGG
ATGGTGATAGAGAGTGCTCAGGAATGCAACTTCTCGGTATCCATGAACAAGCAGCTGTAGGATTCTTAAC
ACTAATGGAAGCTTTACGATATTGTAAGGTTGGTTCTTACTTGAAATCTCCAAAATTCCCTATTTGGATT
GTTGGCAGCGAAACTCACCTCACCGTATTTTTTGCCAAGGATATGGCTTTAGTTGCCCCTGAAGCGCCTT
CGGAACAAGCCAGAAGAGTTTTCCAAACCTATGATCCGGAAGATAATGGATTCATAGCTGACTCCCTTCT
AGAAGATGTCATGAAAGCCTTGGACCTTGTTTCAGATCCCGAGTATATAAATCTCATGAAGAATAAATTA
GATCCAGAAGGACTAGGAATCATATTGTTGGGTCCATTTCTTCAAGAATTTTTTCCTGATCAGGGCTCCA
GTGGTCCAGAATCTTTTACTGTCTACCACTACAATGGATTGAAGCAGTCAAATTATAATGAAAAGGTAAT
GTATGTGGAAGGGACTGCAGTGGTTATGGGTTTTGAAGACCCCATGCTACAGACAGACGACACTCCTATT
AAACGCTGTCTGCAAACCAAATGGCCATACATTGAGTTACTGTGGACCACAGACCGCTGTCCTTCGCTCA
ACTGA

Translation (444 aa):
MSEVTKELLELVWGTKSSPGLSDTIFCRWTQGFVFSESEGSALEQFEGGPCAVIAPVQAFLLKKLLFSSE
KSSWRDCSEEEQKELLCHTLCDIVESAYDSSGSYCLVSWLRGRTPEEAARISGSPAQSSCQVEHSSALAV
EELGFERFHALIQKRSFRTVSELKDAVLDQYSMWGNKFGVLLFLYSVLLTKGIENIKNSIEDANEPLIDP
VYGHGSQSLINLLLTGHAVSNVWDGDRECSGMQLLGIHEQAAVGFLTLMEALRYCKVGSYLKSPKFPIWI
VGSETHLTVFFAKDMALVAPEAPSEQARRVFQTYDPEDNGFIADSLLEDVMKALDLVSDPEYINLMKNKL
DPEGLGIILLGPFLQEFFPDQGSSGPESFTVYHYNGLKQSNYNEKVMYVEGTAVVMGFEDPMLQTDDTPI
KRCLQTKWPYIELLWTTDRCPSLN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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