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Report for CCDS29408.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29408.1 Public Mus musculus 19 Nudt8 23 108 98 CCDS HistoryNCBI Gene:66387Re-query CCDS DB by CCDS ID:29408.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29408.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025802.9 ENSMUSP00000025802.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025802.9Link to Ensembl Protein Viewer:ENSMUSP00000025802.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000025802Re-query CCDS DB by Protein ID:ENSMUSP00000025802
Original member Current member EBI ENSMUST00000155405.7 ENSMUSP00000119218.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000155405.7Link to Ensembl Protein Viewer:ENSMUSP00000119218.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000155405Re-query CCDS DB by Protein ID:ENSMUSP00000119218
Original member Current member NCBI NM_025529.3 NP_079805.1 Accepted alive Link to Nucleotide Sequence:NM_025529.3Link to Protein Sequence:NP_079805.1Re-query CCDS DB by Nucleotide ID:NM_025529Re-query CCDS DB by Protein ID:NP_079805Link to BLAST:NP_079805.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079805.1 210 Q9CR24 210 100% 0 0

Chromosomal Locations for CCDS 29408.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 4000654 4000847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4001196 4001328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4001628 4001705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 4001796 4002023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (633 nt):
ATGCTGCCTGATGGCCTGTCCGCGGAGGACGAGCAGCGCTGCCGGCAGCTGCTAGCACGGACCACTGCCC
GG
TTACGCTCGCGGCCCGCAGCGGCCGCAGTGCTTGTGCCGCTGTGCCTCGTGCGCGGGGTCCCCGCGTT
G
CTCTACACGCTGCGTTCTAGTCGCCTGGTTGGGAGACACAAAGGGGAAGTCAGTTTCCCAGGCGGTAAG
TGT
GATCCCGACGACCAAGATGTAATACATACGGCCCTTCGGGAGACTCAGGAGGAGCTGGGCCTAGAGG
TG
CCCAAGGAGCACGTGTGGGGTGTCCTGCAGCCAGTGTATGACCGGGAAAAGGCAACCATAGTCCCAGT
A
CTTGCCAACGTGGGCCCACTGGATCTGCAGAGCCTTAGGCCCAACCTTGAGGAGGTGGATGAAGTATTT
GAG
ATGTCTCTGGCCCACTTGCTGCAGACACAGAACCAGGGGTATACCCACTTCTGCCAGGGTGGCCACT
TC
AGCTACACACTGCCTGTCTTCTTGCATGGACCACACCGTGTCTGGGGCCTCACAGCTGTCATCACTGA
G
CTCACCCTGAAGCTGCTGGCCCCTGGCTTCTACCAGCCCTCCCTAGCTGTTCCTGAGCTGCCTAGGGGT
TGA


Translation (210 aa):
MLPDGLSAEDEQRCRQLLARTTARLRSRPAAAAVLVPLCLVRGVPALLYTLRSSRLVGRHKGEVSFPGGK
C
DPDDQDVIHTALRETQEELGLEVPKEHVWGVLQPVYDR
EKATIVPVLANVGPLDLQSLRPNLEEVDEVF
E
MSLAHLLQTQNQGYTHFCQGGHFSYTLPVFLHGPHRVWGLTAVITELTLKLLAPGFYQPSLAVPELPRG




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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