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Report for CCDS26758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26758.1 Public Mus musculus 13 Dimt1 23 108 98 CCDS HistoryNCBI Gene:66254Re-query CCDS DB by CCDS ID:26758.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26758.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022203.9 ENSMUSP00000022203.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022203.9Link to Ensembl Protein Viewer:ENSMUSP00000022203.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022203Re-query CCDS DB by Protein ID:ENSMUSP00000022203
Original member Current member NCBI NM_025447.4 NP_079723.1 Accepted alive Link to Nucleotide Sequence:NM_025447.4Link to Protein Sequence:NP_079723.1Re-query CCDS DB by Nucleotide ID:NM_025447Re-query CCDS DB by Protein ID:NP_079723Link to BLAST:NP_079723.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079723.1 313 Q9D0D4 313 100% 0 0

Chromosomal Locations for CCDS 26758.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 106947205 106947283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106947586 106947659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106948701 106948787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106949555 106949616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106949692 106949785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106949869 106949918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106951818 106951941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106952316 106952408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106953434 106953498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106954676 106954739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106957094 106957200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106958655 106958697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGCCGAAGGCCAAGTCCGCAGCGAGTAGCCGCCGGCGGGATCGTCAGGAGCAGCGCCGGGAGCTGAAGC
GAGCTGGAGGACTCATGTTCAACACAGGGATCGGACAACACATTTTGAAAAATCCTCTAATTGTTAACAG
CATCATCGATAAGGCTGCTTTAAGACCTACCGATGTGGTGCTGGAAGTTGGGCCTGGGACTGGCAATATG
ACTGTCAAGCTGTTAGAAAAGGCCAAAAAGGTAGTTGCCTGTGAACTTGATCCAAGGCTAGTAGCTGAAC
TTCACAAAAGAGTTCAGGGCACGCCTCTGGCCAGCAAACTCCAGGTCCTGGTGGGAGATGTACTGAAATC
AGATTTGCCATTCTTTGATGCTTGTGTGGCAAACTTGCCTTATCAGATCTCCTCTCCCTTTGTCTTCAAG
TTGCTGCTCCACCGGCCATTTTTCAGATGTGCTATACTTATGTTTCAGAGAGAGTTTGCTCTTCGATTGG
TTGCCAAGCCTGGAGATAAATTATACTGTAGACTCTCCATCAACACACAGCTTTTAGCACGCGTGGACCA
TCTAATGAAGGTGGGGAAGAATAACTTCAGACCGCCCCCCAAGGTGGAGTCCAGCGTGGTCAGGATAGAA
CCTAAGAATCCGCCACCACCAATCAATTTTCAGGAATGGGACGGCTTAGTAAGGATCACTTTTGTTCGGA
AAAACAAGACACTGTCCGCTGCATTCAAATCAAGTGCAGTACAACAACTGTTGGAAAAAAATTACAGAAT
TCACTGTTCAGTACAGAATACTGTAATACCAGAAGATTTCAGTATAGCAGATAAAATACAGCAAATCCTA
ACCAGCACAGGTTTCAGTGACAAACGGGCCCGTTCCATGGACATAGATGACTTCATCAGGTTGCTACATG
GATTCAATGCAGAAGGCATCCACTTCTCCTAG

Translation (313 aa):
MPKAKSAASSRRRDRQEQRRELKRAGGLMFNTGIGQHILKNPLIVNSIIDKAALRPTDVVLEVGPGTGNM
TVKLLEKAKKVVACELDPRLVAELHKRVQGTPLASKLQVLVGDVLKSDLPFFDACVANLPYQISSPFVFK
LLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIE
PKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVQNTVIPEDFSIADKIQQIL
TSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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