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Report for CCDS1814.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1814.1 Public Homo sapiens 2 ABCG5 24 110 108 CCDS HistoryNCBI Gene:64240Re-query CCDS DB by CCDS ID:1814.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1814.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405322.8 ENSP00000384513.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000405322.8Link to Ensembl Protein Viewer:ENSP00000384513.2Re-query CCDS DB by Nucleotide ID:ENST00000405322Re-query CCDS DB by Protein ID:ENSP00000384513
Original member Current member NCBI NM_022436.3 NP_071881.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022436.3Link to Protein Sequence:NP_071881.1Re-query CCDS DB by Nucleotide ID:NM_022436Re-query CCDS DB by Protein ID:NP_071881Link to BLAST:NP_071881.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071881.1 651 Q9H222-1 651 100% 0 0

Chromosomal Locations for CCDS 1814.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 43813116 43813309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43814477 43814589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43819915 43820100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43822797 43822935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43823913 43824118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43824219 43824432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43824889 43825018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43826382 43826521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43827983 43828115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43831769 43831867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43831947 43832083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43837834 43837955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 43838537 43838679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1956 nt):
ATGGGTGACCTCTCATCTTTGACCCCCGGAGGGTCCATGGGTCTCCAAGTAAACAGAGGCTCCCAGAGCT
CCCTGGAGGGGGCTCCTGCCACCGCCCCGGAGCCTCACAGCCTGGGCATCCTCCATGCCTCCTACAGCGT
CAGCCACCGCGTGAGGCCCTGGTGGGACATCACATCTTGCCGGCAGCAGTGGACCAGGCAGATCCTCAAA
GATGTCTCCTTGTACGTGGAGAGCGGGCAGATCATGTGCATCCTAGGAAGCTCAGGCTCCGGGAAAACCA
CGCTGCTGGACGCCATGTCCGGGAGGCTGGGGCGCGCGGGGACCTTCCTGGGGGAGGTGTATGTGAACGG
CCGGGCGCTGCGCCGGGAGCAGTTCCAGGACTGCTTCTCCTACGTCCTGCAGAGCGACACCCTGCTGAGC
AGCCTCACCGTGCGCGAGACGCTGCACTACACCGCGCTGCTGGCCATCCGCCGCGGCAATCCCGGCTCCT
TCCAGAAGAAGGTGGAGGCCGTCATGGCAGAGCTGAGTCTGAGCCATGTGGCAGACCGACTGATTGGCAA
CTACAGCTTGGGGGGCATTTCCACGGGTGAGCGGCGCCGGGTCTCCATCGCAGCCCAGCTGCTCCAGGAT
CCTAAGGTCATGCTGTTTGATGAGCCAACCACAGGCCTGGACTGCATGACTGCTAATCAGATTGTCGTCC
TCCTGGTGGAACTGGCTCGCAGGAACCGAATTGTGGTTCTCACCATTCACCAGCCCCGTTCTGAGCTTTT
TCAGCTCTTTGACAAAATTGCCATCCTGAGCTTCGGAGAGCTGATTTTCTGTGGCACGCCAGCGGAAATG
CTTGATTTCTTCAATGACTGCGGTTACCCTTGTCCTGAACATTCAAACCCTTTTGACTTCTATATGGACC
TGACGTCAGTGGATACCCAAAGCAAGGAACGGGAAATAGAAACCTCCAAGAGAGTCCAGATGATAGAATC
TGCCTACAAGAAATCAGCAATTTGTCATAAAACTTTGAAGAATATTGAAAGAATGAAACACCTGAAAACG
TTACCAATGGTTCCTTTCAAAACCAAAGATTCTCCTGGAGTTTTCTCTAAACTGGGTGTTCTCCTGAGGA
GAGTGACAAGAAACTTGGTGAGAAATAAGCTGGCAGTGATTACGCGTCTCCTTCAGAATCTGATCATGGG
TTTGTTCCTCCTTTTCTTCGTTCTGCGGGTCCGAAGCAATGTGCTAAAGGGTGCTATCCAGGACCGCGTA
GGTCTCCTTTACCAGTTTGTGGGCGCCACCCCGTACACAGGCATGCTGAACGCTGTGAATCTGTTTCCCG
TGCTGCGAGCTGTCAGCGACCAGGAGAGTCAGGACGGCCTCTACCAGAAGTGGCAGATGATGCTGGCCTA
TGCACTGCACGTCCTCCCCTTCAGCGTTGTTGCCACCATGATTTTCAGCAGTGTGTGCTACTGGACGCTG
GGCTTACATCCTGAGGTTGCCCGATTTGGATATTTTTCTGCTGCTCTCTTGGCCCCCCACTTAATTGGTG
AATTTCTAACTCTTGTGCTACTTGGTATCGTCCAAAATCCAAATATAGTCAACAGTGTAGTGGCTCTGCT
GTCCATTGCGGGGGTGCTTGTTGGATCTGGATTCCTCAGAAACATACAAGAAATGCCCATTCCTTTTAAA
ATCATCAGTTATTTTACATTCCAAAAATATTGCAGTGAGATTCTTGTAGTCAATGAGTTCTACGGACTGA
ATTTCACTTGTGGCAGCTCAAATGTTTCTGTGACAACTAATCCAATGTGTGCCTTCACTCAAGGAATTCA
ATTCATTGAGAAAACCTGCCCAGGTGCAACATCTAGATTCACAATGAACTTTCTGATTTTGTATTCATTT
ATTCCAGCTCTTGTCATCCTAGGAATAGTTGTTTTCAAAATAAGGGATCATCTCATTAGCAGGTAG

Translation (651 aa):
MGDLSSLTPGGSMGLQVNRGSQSSLEGAPATAPEPHSLGILHASYSVSHRVRPWWDITSCRQQWTRQILK
DVSLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFLGEVYVNGRALRREQFQDCFSYVLQSDTLLS
SLTVRETLHYTALLAIRRGNPGSFQKKVEAVMAELSLSHVADRLIGNYSLGGISTGERRRVSIAAQLLQD
PKVMLFDEPTTGLDCMTANQIVVLLVELARRNRIVVLTIHQPRSELFQLFDKIAILSFGELIFCGTPAEM
LDFFNDCGYPCPEHSNPFDFYMDLTSVDTQSKEREIETSKRVQMIESAYKKSAICHKTLKNIERMKHLKT
LPMVPFKTKDSPGVFSKLGVLLRRVTRNLVRNKLAVITRLLQNLIMGLFLLFFVLRVRSNVLKGAIQDRV
GLLYQFVGATPYTGMLNAVNLFPVLRAVSDQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTL
GLHPEVARFGYFSAALLAPHLIGEFLTLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFK
IISYFTFQKYCSEILVVNEFYGLNFTCGSSNVSVTTNPMCAFTQGIQFIEKTCPGATSRFTMNFLILYSF
IPALVILGIVVFKIRDHLISR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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