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Report for CCDS26122.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26122.1 Public Mus musculus 12 Moap1 23 108 98 CCDS HistoryNCBI Gene:64113Re-query CCDS DB by CCDS ID:26122.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26122.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000173760.8 ENSMUSP00000133459.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173760.8Link to Ensembl Protein Viewer:ENSMUSP00000133459.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000173760Re-query CCDS DB by Protein ID:ENSMUSP00000133459
Original member Current member EBI ENSMUST00000178384.1 ENSMUSP00000137010.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178384.1Link to Ensembl Protein Viewer:ENSMUSP00000137010.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178384Re-query CCDS DB by Protein ID:ENSMUSP00000137010
Original member Current member NCBI NM_001142937.2 NP_001136409.1 Accepted alive Link to Nucleotide Sequence:NM_001142937.2Link to Protein Sequence:NP_001136409.1Re-query CCDS DB by Nucleotide ID:NM_001142937Re-query CCDS DB by Protein ID:NP_001136409Link to BLAST:NP_001136409.1
Original member Current member NCBI NM_022323.7 NP_071718.1 Accepted alive Link to Nucleotide Sequence:NM_022323.7Link to Protein Sequence:NP_071718.1Re-query CCDS DB by Nucleotide ID:NM_022323Re-query CCDS DB by Protein ID:NP_071718Link to BLAST:NP_071718.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136409.1 352 Q9ERH6 352 100% 0 0
NP_071718.1 352 Q9ERH6 352 100% 0 0

Chromosomal Locations for CCDS 26122.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 102742230 102743288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGACACTGAGACTTCTAGAAGACTGGTGCAGAGGGATGGATATGAATCCTCGGAAAGCACTATTGGTTG
CCGGCATCCCTCCGACCTGCGGAGTGGCAGACATAGAGGAGGCCCTGCAGGCTGGCCTTGCTCCCTTAGG
GGAACACAGACTGCTTGGGAGGATGTTCAGGAGGGATGAGAACAAGAATGTAGCCCTGATTGGGCTTACA
GTAGAGACTGGCAGTGCCCTGGTCCCCAAGGAAATACCTGCAAAAGGAGGTGTCTGGAGAGTGATCTTTA
AGCCTCCTGATACTGATAGTGACTTTTTGTGCAGATTAAATGAGTTTTTAAAGGGGGAGGGCATGACGAT
GGGTGAATTAACCAGAGTTCTTGGGAATCGGAATGACCCTCTCGGCCTAGACCCGGGCATAATGATCCCT
GAAATTCGAGCACCCATGTTAGCACAGGCATTAAATGAGGCCCTTAAGCCTACCCTGCAGTATCTGAGGT
ACAAAAAGCTGAGTGTGTTCTCAGGCAGGGATCCTCCAGGACCAGGTGAGGAAGAATTTGAATCTTGGAT
GTTTCATACTTCCCAAGTAATGAAAACATGGCAGGTGTCAGATGTAGAGAAAAGAAGGCGGTTGATAGAG
AGCCTTAGAGGTCCAGCATTTGAAATTATTCGAGTCCTCAAGATAAACAACCCCTTCATTACAGTTGCAG
AATGCCTGAAGACGCTTGAGACAATATTTGGGATTATTGATAATCCTAGAGCATTGCAGGTCAAATACCT
TACTACTTATCAGAAGACTGATGAAAAGCTGTCTGCCTATGTTCTAAGGTTGGAGCCTTTATTGCAGAAA
CTGGTTCAGAAAGGAGCAATTGAGAAAGAAGTTGTGAATCAGGCCCGTCTAGACCAAGTCATTGCTGGGG
CAGTCCACAAATCAGTTCGAAGAGAGCTTGGGCTGCCGGAGGGTAGCCCAGCCCCAGGCTTACTGCAGTT
GCTGACACTGATAAAAGATAAGGAGGCCGAAGAAGAAGAGGTCCTCCTTCAGGCCGAATTAGAAGGCTAT
TGCACTTGA

Translation (352 aa):
MTLRLLEDWCRGMDMNPRKALLVAGIPPTCGVADIEEALQAGLAPLGEHRLLGRMFRRDENKNVALIGLT
VETGSALVPKEIPAKGGVWRVIFKPPDTDSDFLCRLNEFLKGEGMTMGELTRVLGNRNDPLGLDPGIMIP
EIRAPMLAQALNEALKPTLQYLRYKKLSVFSGRDPPGPGEEEFESWMFHTSQVMKTWQVSDVEKRRRLIE
SLRGPAFEIIRVLKINNPFITVAECLKTLETIFGIIDNPRALQVKYLTTYQKTDEKLSAYVLRLEPLLQK
LVQKGAIEKEVVNQARLDQVIAGAVHKSVRRELGLPEGSPAPGLLQLLTLIKDKEAEEEEVLLQAELEGY
CT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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