NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS20591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20591.1 Public Mus musculus 6 Klrc3 23 108 98 CCDS HistoryNCBI Gene:58179Re-query CCDS DB by CCDS ID:20591.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20591.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071149.6 ENSMUSP00000071147.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071149.6Link to Ensembl Protein Viewer:ENSMUSP00000071147.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000071149Re-query CCDS DB by Protein ID:ENSMUSP00000071147
Original member Current member NCBI NM_021378.1 NP_067353.1 Accepted alive Link to Nucleotide Sequence:NM_021378.1Link to Protein Sequence:NP_067353.1Re-query CCDS DB by Nucleotide ID:NM_021378Re-query CCDS DB by Protein ID:NP_067353Link to BLAST:NP_067353.1

Chromosomal Locations for CCDS 20591.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 129639085 129639202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129639529 129639629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129641396 129641571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129642710 129642811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 129643120 129643288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGAGTCACCTGCTTGGAACTGAACAGGCCTCAGAACCCAGGAAAGCCACAAAGAAAACCCAGGCGCAGC
TCCGTTTCAGTAATGCAGCAGGAGATCGCCTGCTGGAGTTTAGCCTTCAACATGCTTCCCAGAAGCATCT
GAAGGCCAGCAGGCATGGCTACTGCAAAAATTTTGCATCACCTCCAGAGAAGCTCATCGCTGGAATCCTG
GGCACCATCTGGTTTACCTTATTGATTGCTCTAGTAATCTCAACCAGAATTGTTTCTCCATATATAAACC
ACAGTCTATCTTCAGCACAAACTTATGCTCTTTGTCCAAAGGAATGGATCTTATATTCTCACAATTGTTA
TTACATTGGCATGGAAAGAAAATCTTGGAATGACAGTTTGGTGTCCTGCATTTCCAAAAACTGTAGTCTG
CTTTATATAGACAGTGAAGAGGAGCAGGACTTTCTGCAATCCCTTTCACTGGTCTCATGGACTGGAATCC
TTCGGAAGGGCAGAGGTCAGCCCTGGGTCTGGAAAAAAGACTCAACTTTCAAACCAAAGATAGCAGAGAT
TCTCCATGATGAATGTAACTGTGCCATGATGTCAGCTTCTGGTCTCACAGCAGACAGCTGTACAACTTTA
CATCCATATCTTTGTAAGTGTAAATTCCCCATCTGA

Translation (221 aa):
MSHLLGTEQASEPRKATKKTQAQLRFSNAAGDRLLEFSLQHASQKHLKASRHGYCKNFASPPEKLIAGIL
GTIWFTLLIALVISTRIVSPYINHSLSSAQTYALCPKEWILYSHNCYYIGMERKSWNDSLVSCISKNCSL
LYIDSEEEQDFLQSLSLVSWTGILRKGRGQPWVWKKDSTFKPKIAEILHDECNCAMMSASGLTADSCTTL
HPYLCKCKFPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH