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Report for CCDS23771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23771.1 Public Mus musculus 10 Sult3a1 23 108 98 CCDS HistoryNCBI Gene:57430Re-query CCDS DB by CCDS ID:23771.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23771.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092597.3 ENSMUSP00000090259.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092597.3Link to Ensembl Protein Viewer:ENSMUSP00000090259.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000092597Re-query CCDS DB by Protein ID:ENSMUSP00000090259
Original member Current member EBI ENSMUST00000218204.1 ENSMUSP00000151228.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000218204.1Link to Ensembl Protein Viewer:ENSMUSP00000151228.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000218204Re-query CCDS DB by Protein ID:ENSMUSP00000151228
Original member Current member NCBI NM_020565.2 NP_065590.2 Accepted alive Link to Nucleotide Sequence:NM_020565.2Link to Protein Sequence:NP_065590.2Re-query CCDS DB by Nucleotide ID:NM_020565Re-query CCDS DB by Protein ID:NP_065590Link to BLAST:NP_065590.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065590.2 293 O35403 293 98.9761% 0 3

Chromosomal Locations for CCDS 23771.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 33863947 33864088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 33866521 33866729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 33869150 33869276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 33870164 33870258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 33877283 33877469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 33879201 33879322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGACAATAAAGATGAATATTTGCTTAACTTCAAAGGCTATAATTTTCAGAAAACTTTAGTTAAAATGG
AAGTAGTGGAAAATATAGAAAATTATGAAATTCGAGATGATGACATCTTCATTGTCACATATCCAAAGTC
TGGTACCATCTGGACCCAGCAGATCCTTTCCTTGATTTATTTTGAGGGTCATCGGAACAGAACTGAAAAC
ATCGAAACAATAGATAGAGCACCATTTTTTGAGTACAATATTCACAAATTAGACTATGCCAAAATGCCAT
CACCTCGCATCTTCAGTTCCCACATTCCATATTACTTAGTACCAAAAGGTCTCAAGGACAAAAAAGCCAA
AATTCTTTATATCTACAGAAATCCTAAAGATGTTTTGATCTCCTATTTTCATTTCTCAAATTTGATGCTT
ATATTTCAAAATCCAGACACTGTAGAAAGTTTTATGCAAACATTTCTAGATGGAGATGTGGTAGGAAGCC
TTTGGTTTGACCACATAAGAGGCTGGTATGAACACAGACATGATTTCAATATTATGTTCATGAGCTTTGA
AGACATGAAGAAGGACCTCAGAAGCTCAGTGCTTAAAATCTGCAGTTTTCTGGAGAAAGAACTGAGTGAA
GAAGATGTGGATGCTGTTGTGAGACAAGCTACCTTTCAGAAAATGAAAGCTGACCCAAGAGCAAACTATG
AACACATTATAAAAGATGAACTCGGAACAAGAAATGAGATGGGAAGTTTCCTTCGCAAAGGTGTTGTTGG
AGACTGGAAACATTATTTGACTGTGGATCAGAGTGAAAGATTTGACAAGATATTTCACAGAAACATGAAA
AACATCCCCTTAAAATTCATCTGGGACATAAATGAGGAGTAG

Translation (293 aa):
MDNKDEYLLNFKGYNFQKTLVKMEVVENIENYEIRDDDIFIVTYPKSGTIWTQQILSLIYFEGHRNRTEN
IETIDRAPFFEYNIHKLDYAKMPSPRIFSSHIPYYLVPKGLKDKKAKILYIYRNPKDVLISYFHFSNLML
IFQNPDTVESFMQTFLDGDVVGSLWFDHIRGWYEHRHDFNIMFMSFEDMKKDLRSSVLKICSFLEKELSE
EDVDAVVRQATFQKMKADPRANYEHIIKDELGTRNEMGSFLRKGVVGDWKHYLTVDQSERFDKIFHRNMK
NIPLKFIWDINEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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