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Report for CCDS52699.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52699.1 Public Mus musculus 8 Zfp276 23 108 98 CCDS HistoryNCBI Gene:57247Re-query CCDS DB by CCDS ID:52699.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52699.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001092.14 ENSMUSP00000001092.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001092.14Link to Ensembl Protein Viewer:ENSMUSP00000001092.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000001092Re-query CCDS DB by Protein ID:ENSMUSP00000001092
Original member Current member NCBI NM_020497.2 NP_065243.2 Accepted alive Link to Nucleotide Sequence:NM_020497.2Link to Protein Sequence:NP_065243.2Re-query CCDS DB by Nucleotide ID:NM_020497Re-query CCDS DB by Protein ID:NP_065243Link to BLAST:NP_065243.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065243.2 614 Q8CE64-1 614 100% 0 0

Chromosomal Locations for CCDS 52699.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123254716 123254923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123255707 123256010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123256284 123256330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123256419 123256865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123258311 123258389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123259431 123259514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123264816 123264926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123264995 123265070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123265314 123265431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123267600 123267699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123267770 123268040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1845 nt):
ATGAAGCGGGACCGCCTCGGCCGCTTCCTGTCTCCCGGAATAGCTCGGCAGCGCGGGGGTTCGGGCGGCG
GCTGTGGAAGCGGTCGGACTCGGGGTCGCCCTTCTCGCAGCGGCGGAACGAGCGCTGACGGGGCGGCTGC
TCAGCTCAGCTGGGGCTCGATGACACGCTCCTGCGGGGACACAGGCGACGACGGTACAGACGAAGCTGGA
GCAGGCCGGACTCTCGCTATGGGGCATTGTCGACTCTGCCATGGGAAGTTTTCCTCACGGAGCCTCCGAA
GCATCTCTGACAGAGTGCCTGGGGAGACTTCAGAAAGACTGTCCCCAGGAGAGCGTGTCTTCATTAGGGA
CTTCCAGCGTCTGCTGGGTGTCGCTGTGCACCAGGACCCAGCCCTGCCTCAGTCTGTCTGCAAGAACTGC
TACACCCAATTCTATCAGTGCCACAGCCTTCTCAGGACCTTCTTACAGAGAGTCAACGTCTCCCCAGCTG
GCCAGAGGAAGCCTTGTACAAAGGTTGGTGTTCAGCCTACCACAGTGGCAGAGGAGGGAGCATGTGTGGC
TGACCTGATCGCCTCCAGCCCTCGGTGTCTGCACGGCTTGGTGGGCTGGGTGCATGAGCATGCAGTCAGC
TGTGGGTCTCTGCCCAGCCTCCAGAGGACACTGTCCTCTGAGTACTGCGGCATCATCCAGGCTGTGTGGG
GCTGCGACCAGGGCCACGACTTCACCATGGACACAGCCTCCAGCTGCAGAGCTCTCTTTTTGGACAGTGC
ATTAGCAGTGAAATGGGCGTGGGGCAAGGACCTGTCACCACGGCTGGCCCAGAACTCAGAGTCCAACCCC
ACGGGAGCTGCCTCTCGGCTCTGCCAGGCCAGAGAAACCCAAGTTGGATCTGAGACCAAGACACTCCCCA
GTGTGGATGTGGCCCTGCTGCACTCACATGGAGACTCTGTGGGACCTGGGCTAGGCCCCTGTACGCAGCC
ACACTTGGCTCCCAGTGAGGCCCCAGGGCAACTGGGTGAGACGCAGGTTCCCTCGTCAACCTCGGATGAT
CGGGTAAAAGACGAGTTCAGTGACCTTTCTGAGGGAGACTTCCTGAGCGAAGATGAGAGTGATAAGAAAC
AGACACCTCAGTCCTCGGATGAGTCCTTTGAGCCTTACCCAGAAAAGAAGGTCTCTGGTAAGAAGAGCGA
AGGCAGAGAAGCCAAGAGGCCTGAAGAGCCCAAGATCAGAAAGAAGCCTGGGCCCAAGCCCGGATGGAAG
AAAAAGCTTCGCTGTGAGAGGGAGGAGCTGCCCACCATCTACAAGTGTCCTTACCAGGGCTGCACAGCTG
TATACCGTGGCGCTGATGGCATGAAGAAGCACATTAAGGAGCACCATGAGGAGGTCCGGGAAAGGCCCTG
CCCACACCCTGGCTGCAACAAGGTATTCATGATCGACCGATACCTTCAGCGACACGTGAAGCTCATCCAC
ACAGAGGTCCGCAATTACATCTGTGACGAGTGCGGGCAGACCTTCAAGCAGCGGAAGCACCTTCTCGTCC
ACCAGATGCGCCACTCGGGAGCCAAGCCACTGCAGTGTGAGGTCTGTGGGTTCCAGTGCAGGCAACGAGC
ATCCCTCAAGTACCACATGACCAAACACAAAGCAGAGACTGAGCTGGACTTCGCCTGTGACCAGTGCGGC
CGACGCTTTGAAAAGGCCCACAACCTCAACGTGCATATGTCCATGGTCCATCCTCTGACCCAGGCCCAGG
ACAGAGCCCTGCCTCTGGAAGCAGAGCCGCCACCTGGGCCTCTGAGCCCCTCTGGGACCATGGAGGGTCA
GGCTGTGAAGCCGGAGCCTACCTGA

Translation (614 aa):
MKRDRLGRFLSPGIARQRGGSGGGCGSGRTRGRPSRSGGTSADGAAAQLSWGSMTRSCGDTGDDGTDEAG
AGRTLAMGHCRLCHGKFSSRSLRSISDRVPGETSERLSPGERVFIRDFQRLLGVAVHQDPALPQSVCKNC
YTQFYQCHSLLRTFLQRVNVSPAGQRKPCTKVGVQPTTVAEEGACVADLIASSPRCLHGLVGWVHEHAVS
CGSLPSLQRTLSSEYCGIIQAVWGCDQGHDFTMDTASSCRALFLDSALAVKWAWGKDLSPRLAQNSESNP
TGAASRLCQARETQVGSETKTLPSVDVALLHSHGDSVGPGLGPCTQPHLAPSEAPGQLGETQVPSSTSDD
RVKDEFSDLSEGDFLSEDESDKKQTPQSSDESFEPYPEKKVSGKKSEGREAKRPEEPKIRKKPGPKPGWK
KKLRCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIH
TEVRNYICDECGQTFKQRKHLLVHQMRHSGAKPLQCEVCGFQCRQRASLKYHMTKHKAETELDFACDQCG
RRFEKAHNLNVHMSMVHPLTQAQDRALPLEAEPPPGPLSPSGTMEGQAVKPEPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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