NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21186.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21186.1 Public Mus musculus 7 Klk4 23 108 98 CCDS HistoryNCBI Gene:56640Re-query CCDS DB by CCDS ID:21186.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21186.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000007161.7 ENSMUSP00000007161.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000007161.7Link to Ensembl Protein Viewer:ENSMUSP00000007161.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000007161Re-query CCDS DB by Protein ID:ENSMUSP00000007161
Original member Current member NCBI NM_019928.2 NP_064312.1 Accepted alive Link to Nucleotide Sequence:NM_019928.2Link to Protein Sequence:NP_064312.1Re-query CCDS DB by Nucleotide ID:NM_019928Re-query CCDS DB by Protein ID:NP_064312Link to BLAST:NP_064312.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064312.1 255 Q9Z0M1 255 100% 0 0

Chromosomal Locations for CCDS 21186.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43881649 43881712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43883556 43883718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43883946 43884196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43884280 43884416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43885234 43885386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGATGGTCACTGCACGAACCCCCTGGGGCTGGTTCCTGGGGTGCCTCATCCTTGAGGTCACAGGAGCCT
CCGCCTCAAGTGTCAGCAGCCGGATCATACAAGGCCAGGACTGCTCCCCACACTCGCAACCCTGGCAGGC
GGCACTGTTCTCAGAAGACGGTTTTTTCTGCTCGGGAGTCTTGGTGCATCCGCAGTGGGTGCTGTCAGCA
GCACATTGCTTACAGGAGTCCTACATCGTGGGACTGGGCCTGCATAACCTGAAAGGCTCCCAAGAGCCTG
GCAGCCGGATGTTAGAGGCCCACCTCTCCATCCAGCACCCCAACTTCAACGATCCTTCTTTTGCAAACGA
TCTCATGCTCATCAAACTGAACGAGTCAGTGATAGAGTCTAACACTATCAGGAGCATCCCTGTGGCTACC
CAATGCCCCACTCCTGGAGATACCTGCCTAGTCTCTGGTTGGGGTCAACTAAAGAATGGGAAACTGCCCA
GCCTCCTGCAGTGTGTGAATCTCTCAGTGGCGTCAGAGGAGACTTGCCGGCTGCTGTATGACCCTGTGTA
CCACCTCAGTATGTTCTGCGCTGGAGGAGGACAGGACCAAAAGGACTCCTGCAATGGGGACTCTGGGGGT
CCCATAGTGTGCAACAGATCCCTACAAGGGCTCGTGTCTATGGGACAAGGAAAGTGTGGGCAGCCTGGCA
TACCAAGTGTCTACACCAATCTCTGCAAGTTCACTAACTGGATCCAGACCATCATTCAGACAAACTAG

Translation (255 aa):
MMVTARTPWGWFLGCLILEVTGASASSVSSRIIQGQDCSPHSQPWQAALFSEDGFFCSGVLVHPQWVLSA
AHCLQESYIVGLGLHNLKGSQEPGSRMLEAHLSIQHPNFNDPSFANDLMLIKLNESVIESNTIRSIPVAT
QCPTPGDTCLVSGWGQLKNGKLPSLLQCVNLSVASEETCRLLYDPVYHLSMFCAGGGQDQKDSCNGDSGG
PIVCNRSLQGLVSMGQGKCGQPGIPSVYTNLCKFTNWIQTIIQTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH