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Report for CCDS30452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30452.1 Public Mus musculus X Ammecr1 23 108 98 CCDS HistoryNCBI Gene:56068Re-query CCDS DB by CCDS ID:30452.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30452.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041317.2 ENSMUSP00000036085.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041317.2Link to Ensembl Protein Viewer:ENSMUSP00000036085.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000041317Re-query CCDS DB by Protein ID:ENSMUSP00000036085
Original member Current member NCBI NM_019496.4 NP_062369.1 Accepted alive Link to Nucleotide Sequence:NM_019496.4Link to Protein Sequence:NP_062369.1Re-query CCDS DB by Nucleotide ID:NM_019496Re-query CCDS DB by Protein ID:NP_062369Link to BLAST:NP_062369.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062369.1 344 Q9JHT5 344 100% 0 0

Chromosomal Locations for CCDS 30452.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 142855533 142855647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142857476 142857572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142858881 142858971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142878110 142878224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142912173 142912283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142966208 142966713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGGCGGCGGGTTGCTGTGGGGTGAAGAAGCAGAAACTGTCCAGTTCGCCCCCCTCCGGCTCGGGTGGTG
GTGGTGGCGCCTCCTCCTCCTCTCACTGCAGCGGGGAGAGCCAGTGCCGAGCCGGGGAGCTGGGACTAGG
AGGCGCCGGGACGCGGCTCAACGGACTGGGCGGGCTGAGCGGCGGCGGCGGCAGCGGCGGCGGCGGTGGC
TGTCCCCTCTCTCCCCCTCAGGGCTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCAGCG
GCGGCGGGGGCATCTCGCTGTCTCCACCTCTGAGCTGCGGAGTGGGAACCCTACTTTCTACTCCGGCCGC
CGCCACCGCCTCCTCGCCGTCCTCCTCGTCCTCATCCCCCGGCTCCCGGAAGATGGTGGTGTCAGCGGAG
ATGTGCTGCTTCTGCTTCGATGTGCTCTACTGTCACCTGTACGGATACCAGCAGCCCCGGACCCCCCGCT
TCACCAACGAGCCCTACCCACTGTTTGTAACATGGAAGATTGGTCGAGACAAAAGACTGCGTGGATGCAT
AGGTACCTTTTCTGCCATGAATTTGCATTCAGGACTCAGGGAGTACACACTTACCAGTGCCCTTAAAGAC
AGCCGTTTTCCACCAATGACAAGGGATGAGCTGCCAAGGCTTTTCTGCTCGGTGTCTCTGCTCACTAACT
TTGAAGATGTTTGCGACTATTTGGACTGGGAGGTGGGTGTGCATGGCATTAGAATAGAATTCATCAATGA
AAAAGGATCAAAACGCACCGCCACCTACCTACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATATTCAG
ACCATAGACTCATTACTGAGAAAAGGAGGATACAAAGCTCCAATTACTAATGAATTCAGAAAAACCATAA
AGCTGACCAGGTACCGTAGTGAAAAGATGACCTTGAGTTATGCTGAATACCTTGCTCATCGCCAGCATCA
TCATTTCCAAAATGGCATCGGGCATCCCCTTCCGCCATACAACCATTATTCCTGA

Translation (344 aa):
MAAGCCGVKKQKLSSSPPSGSGGGGGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLSGGGGSGGGGG
CPLSPPQGCGGGGGGGGGGGSGSGGGGISLSPPLSCGVGTLLSTPAAATASSPSSSSSSPGSRKMVVSAE
MCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWKIGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKD
SRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFINEKGSKRTATYLPEVAKEQGWDHIQ
TIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAEYLAHRQHHHFQNGIGHPLPPYNHYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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