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Report for CCDS10614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10614.1 Public Homo sapiens 16 NDUFAB1 24 110 108 CCDS HistoryNCBI Gene:4706Re-query CCDS DB by CCDS ID:10614.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000007516.8 ENSP00000007516.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000007516.8Link to Ensembl Protein Viewer:ENSP00000007516.2Re-query CCDS DB by Nucleotide ID:ENST00000007516Re-query CCDS DB by Protein ID:ENSP00000007516
Original member Current member EBI ENST00000570319.5 ENSP00000458770.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000570319.5Link to Ensembl Protein Viewer:ENSP00000458770.1Re-query CCDS DB by Nucleotide ID:ENST00000570319Re-query CCDS DB by Protein ID:ENSP00000458770
Original member Current member NCBI NM_005003.3 NP_004994.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005003.3Link to Protein Sequence:NP_004994.1Re-query CCDS DB by Nucleotide ID:NM_005003Re-query CCDS DB by Protein ID:NP_004994Link to BLAST:NP_004994.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004994.1 156 O14561 156 100% 0 0

Chromosomal Locations for CCDS 10614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 23582284 23582375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23585336 23585423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23587197 23587319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 23596123 23596290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (471 nt):
ATGGCGTCTCGTGTCCTTTCAGCCTATGTCAGCCGCCTGCCCGCGGCCTTTGCGCCGCTGCCCCGGGTCC
GGATGCTGGCCGTGGCCCGGCCTCTCAGCACCGCTCTCTGCTCCGCGGGGACCCAGACGAGGCTCGGGAC
TTTGCAGCCGGCCTTAGTGCTCGCGCAGGTTCCTGGTAGAGTTACACAGTTGTGCCGCCAGTATAGCGAC
ATGCCTCCTTTGACGTTAGAGGGCATCCAGGACCGTGTTCTTTACGTATTGAAACTCTATGACAAGATTG
ACCCAGAGAAGCTTTCAGTAAATTCTCATTTTATGAAAGACCTGGGCTTAGACAGTTTGGACCAAGTGGA
GATTATCATGGCCATGGAAGACGAATTTGGGTTTGAAATTCCTGATATAGATGCTGAAAAGTTAATGTGT
CCACAAGAAATTGTAGATTACATTGCAGATAAGAAGGATGTATATGAATAA

Translation (156 aa):
MASRVLSAYVSRLPAAFAPLPRVRMLAVARPLSTALCSAGTQTRLGTLQPALVLAQVPGRVTQLCRQYSD
MPPLTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMC
PQEIVDYIADKKDVYE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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