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Report for CCDS1193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1193.1 Public Homo sapiens 1 KCNJ10 24 110 108 CCDS HistoryNCBI Gene:3766Re-query CCDS DB by CCDS ID:1193.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000638868.1 ENSP00000491250.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638868.1Link to Ensembl Protein Viewer:ENSP00000491250.1Re-query CCDS DB by Nucleotide ID:ENST00000638868Re-query CCDS DB by Protein ID:ENSP00000491250
Original member Current member EBI ENST00000638728.1 ENSP00000492619.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638728.1Link to Ensembl Protein Viewer:ENSP00000492619.1Re-query CCDS DB by Nucleotide ID:ENST00000638728Re-query CCDS DB by Protein ID:ENSP00000492619
Original member Current member EBI ENST00000644903.1 ENSP00000495557.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000644903.1Link to Ensembl Protein Viewer:ENSP00000495557.1Re-query CCDS DB by Nucleotide ID:ENST00000644903Re-query CCDS DB by Protein ID:ENSP00000495557
Original member Current member NCBI NM_002241.5 NP_002232.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002241.5Link to Protein Sequence:NP_002232.2Re-query CCDS DB by Nucleotide ID:NM_002241Re-query CCDS DB by Protein ID:NP_002232Link to BLAST:NP_002232.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002232.2 379 P78508 379 100% 0 0

Chromosomal Locations for CCDS 1193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 160041393 160042532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGACGTCAGTTGCCAAGGTGTATTACAGTCAGACCACTCAGACAGAAAGCCGGCCCCTAATGGGCCCAG
GGATACGACGGCGGAGAGTCCTGACAAAAGATGGTCGCAGCAACGTGAGAATGGAGCACATTGCCGACAA
GCGCTTCCTCTACCTCAAGGACCTGTGGACAACCTTCATTGACATGCAGTGGCGCTACAAGCTTCTGCTC
TTCTCTGCGACCTTTGCAGGCACATGGTTCCTCTTTGGCGTGGTGTGGTATCTGGTAGCTGTGGCACATG
GGGACCTGCTGGAGCTGGACCCCCCGGCCAACCACACCCCCTGTGTGGTACAGGTGCACACACTCACTGG
AGCCTTCCTCTTCTCCCTTGAATCCCAAACCACCATTGGCTATGGCTTCCGCTACATCAGTGAGGAATGT
CCACTGGCCATTGTGCTTCTTATTGCCCAGCTGGTGCTCACCACCATCCTGGAAATCTTCATCACAGGTA
CCTTCCTGGCGAAGATTGCCCGGCCCAAGAAGCGGGCTGAGACCATTCGTTTCAGCCAGCATGCAGTTGT
GGCCTCCCACAATGGCAAGCCCTGCCTCATGATCCGAGTTGCCAATATGCGCAAAAGCCTCCTCATTGGC
TGCCAGGTGACAGGAAAACTGCTTCAGACCCACCAAACCAAGGAAGGGGAGAACATCCGGCTCAACCAGG
TCAATGTGACTTTCCAAGTAGACACAGCCTCTGACAGCCCCTTCCTTATTCTACCCCTTACCTTCTATCA
TGTGGTAGATGAGACCAGTCCCTTGAAAGATCTCCCTCTTCGCAGTGGTGAGGGTGACTTTGAGCTGGTG
CTGATCCTAAGTGGGACAGTGGAGTCCACCAGTGCCACCTGTCAGGTGCGCACTTCCTACCTGCCAGAGG
AGATCCTTTGGGGCTACGAGTTCACACCTGCCATCTCACTGTCAGCCAGTGGTAAATACATAGCTGACTT
TAGCCTTTTTGACCAAGTTGTGAAAGTGGCCTCTCCTAGTGGCCTCCGTGACAGCACTGTACGCTACGGA
GACCCTGAAAAGCTCAAGTTGGAGGAGTCATTAAGGGAGCAAGCTGAGAAGGAGGGCAGTGCCCTTAGTG
TGCGCATCAGCAATGTCTGA

Translation (379 aa):
MTSVAKVYYSQTTQTESRPLMGPGIRRRRVLTKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLLL
FSATFAGTWFLFGVVWYLVAVAHGDLLELDPPANHTPCVVQVHTLTGAFLFSLESQTTIGYGFRYISEEC
PLAIVLLIAQLVLTTILEIFITGTFLAKIARPKKRAETIRFSQHAVVASHNGKPCLMIRVANMRKSLLIG
CQVTGKLLQTHQTKEGENIRLNQVNVTFQVDTASDSPFLILPLTFYHVVDETSPLKDLPLRSGEGDFELV
LILSGTVESTSATCQVRTSYLPEEILWGYEFTPAISLSASGKYIADFSLFDQVVKVASPSGLRDSTVRYG
DPEKLKLEESLREQAEKEGSALSVRISNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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