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Report for CCDS21881.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21881.1 Public Mus musculus 7 Zfp668 23 108 98 CCDS HistoryNCBI Gene:244219Re-query CCDS DB by CCDS ID:21881.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21881.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054415.11 ENSMUSP00000056105.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054415.11Link to Ensembl Protein Viewer:ENSMUSP00000056105.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000054415Re-query CCDS DB by Protein ID:ENSMUSP00000056105
Original member Current member EBI ENSMUST00000106261.7 ENSMUSP00000101868.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106261.7Link to Ensembl Protein Viewer:ENSMUSP00000101868.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106261Re-query CCDS DB by Protein ID:ENSMUSP00000101868
Original member Current member EBI ENSMUST00000106262.1 ENSMUSP00000101869.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106262.1Link to Ensembl Protein Viewer:ENSMUSP00000101869.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106262Re-query CCDS DB by Protein ID:ENSMUSP00000101869
Original member Current member EBI ENSMUST00000106263.7 ENSMUSP00000101870.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106263.7Link to Ensembl Protein Viewer:ENSMUSP00000101870.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106263Re-query CCDS DB by Protein ID:ENSMUSP00000101870
Original member Current member NCBI NM_001362189.1 NP_001349118.1 Accepted alive Link to Nucleotide Sequence:NM_001362189.1Link to Protein Sequence:NP_001349118.1Re-query CCDS DB by Nucleotide ID:NM_001362189Re-query CCDS DB by Protein ID:NP_001349118Link to BLAST:NP_001349118.1
Original member Current member NCBI NM_001362190.1 NP_001349119.1 Accepted alive Link to Nucleotide Sequence:NM_001362190.1Link to Protein Sequence:NP_001349119.1Re-query CCDS DB by Nucleotide ID:NM_001362190Re-query CCDS DB by Protein ID:NP_001349119Link to BLAST:NP_001349119.1
Original member Current member NCBI NM_001362191.1 NP_001349120.1 Accepted alive Link to Nucleotide Sequence:NM_001362191.1Link to Protein Sequence:NP_001349120.1Re-query CCDS DB by Nucleotide ID:NM_001362191Re-query CCDS DB by Protein ID:NP_001349120Link to BLAST:NP_001349120.1
Original member Current member NCBI NM_001362192.1 NP_001349121.1 Accepted alive Link to Nucleotide Sequence:NM_001362192.1Link to Protein Sequence:NP_001349121.1Re-query CCDS DB by Nucleotide ID:NM_001362192Re-query CCDS DB by Protein ID:NP_001349121Link to BLAST:NP_001349121.1
Original member Current member NCBI NM_146259.4 NP_666371.1 Accepted alive Link to Nucleotide Sequence:NM_146259.4Link to Protein Sequence:NP_666371.1Re-query CCDS DB by Nucleotide ID:NM_146259Re-query CCDS DB by Protein ID:NP_666371Link to BLAST:NP_666371.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001349118.1 619 Q8K2R5 619 100% 0 0
NP_001349119.1 619 Q8K2R5 619 100% 0 0
NP_001349120.1 619 Q8K2R5 619 100% 0 0
NP_001349121.1 619 Q8K2R5 619 100% 0 0
NP_666371.1 619 Q8K2R5 619 100% 0 0

Chromosomal Locations for CCDS 21881.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127866151 127867363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127867756 127868402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGGAAGTGGAGGCTACAGAGGCCAGGTCCCCAGGCCCCTGCTACAAGCGCTCTGGCCGCCGTTATAAGT
GCCTGTTTTGTACAAAGACATTTCCAAATGCACCCAGGGCAGCCCGCCATGCTGCTACACATACACCCAC
AGACTGCACAGAGGAGGTGAGGGAGGCCCAGCCAAAAGTGGATACAGAGCCCAAGGCGGAGGAAGCCAGC
GGAGACAAGGTATCAGCTTCAGTAGCCAAGCCCCGGCCCTATGCCTGCCCACTGTGCCCCAAGGCCTACA
AGACAGCTCCTGAGCTACGCAGCCATGGGCGCAGCCACACTGGTGAGAAACCCTTCCCGTGCCCAGAGTG
TGGCCGCCGCTTCATGCAGCCAGTGTGCCTGCGTGTGCACCTGGCCTCACATGCCGGTGAGCTGCCCTTC
CGATGCACACACTGCCCCAAGGCTTATGGTACACTCTCTAAACTAAAGATCCACCAGCGTGGGCACACAG
GTGAGCGGCCCTATGCCTGTCCTGACTGCGGCAAGAGCTTTGCTGATCCTTCAGTGTTCCGCAAGCATCG
GCGCACCCATGCCGGCCTTCGACCCTACAGCTGCGAGCGCTGCGGCAAGGCCTATGCTGAGCTCAAGGAC
TTACGCAACCATGAAAGGTCCCACACGGGTGAGCGCCCCTTCCTCTGCTCGGAGTGTGGTAAAAGCTTCT
CTCGATCCTCTTCCCTCACATGCCACCAGCGTATCCATGCAGCCCAGAAACCCTATCGCTGCCCGGCTTG
TGGGAAGGGCTTCACACAGCTCAGCTCTTACCAAAGCCATGAGCGCACACATTCAGGCGAGAAGCCCTTC
CTGTGCCCACGGTGTGGCCGCATGTTTTCTGATCCGTCAAGCTTCCGCCGTCACCAGCGCGCACATGAGG
GCGTAAAGCCTTACCGCTGCGAGAAATGTGGCAAGGACTTCCGGCAGCCCGCCGACCTGGCCATGCATCG
GCGAGTACACACCGGCGACCGACCCTTCAAGTGCCTGCAGTGTGACAAGACTTTTGTGGCTTCCTGGGAC
CTCAAGCGGCATGCGTTGGTGCACTCAGGACAGCGGCCATTCCGCTGTGAGGAGTGTGGGCGAGCATTTG
CTGAGCGAGCTAGCCTCACGAAGCACAGCCGCATGCACTCTGGGGAGCGTCCTTTCCACTGTAATGCCTG
TGGGAAATCCTTTGTGGTGTTATCCAGCCTCAGGAAGCATGAGCGTACCCACAGAAGCAACGAGACTACA
GGAGCTGCCCCCCAGCAGGAGTTGGTGCTGGGACTGGCACTGCCTGTAGGTGTCGTAGGTGAGGGCTCGG
CCGCCCCCGTGGCGGGTGCAGGGGTAGGGGATGCTCCAGCGGGGCTGTTAGGGTTACCCCCTGAGTCTGG
TGGTGTAGTGGCCACACAGTGGCAAGTGGTGGGTATGACTGTGGAACATGTGGAGTGCCAGGATGCTGGC
GTTGGGGAAGCGCCTAGTACCCTGGGAGATGCAGGAGAGGTGGGGGGTGAGGAGACTGATGAGAAGCCCC
CACAGTTTGTGTGTCGCGAGTGCAAAGAAACTTTCTCCACACTGACACTGCTACGCAGGCACGAGCGCTC
ACACCCGGAGCTCCGGCCCTTTCCCTGCACTCAGTGTGGTAAGAGCTTCTCAGACAGGGCTGGGCTTCGA
AAGCATAGCCGCACCCACAGCTCTGTCCGCCCCTACTCCTGTTCCCAATGTCCTAAAGCTTTCCTGAGTG
CCAGTGACCTGCGCAAGCATGAACGCACCCACCCCGTGCCCATCGGGACCCCCATACCCCTGGAACCTCT
TGTGGCTTTGCTAGGAATGCCAGAAGAAGGGTCAGCTTGA

Translation (619 aa):
MEVEATEARSPGPCYKRSGRRYKCLFCTKTFPNAPRAARHAATHTPTDCTEEVREAQPKVDTEPKAEEAS
GDKVSASVAKPRPYACPLCPKAYKTAPELRSHGRSHTGEKPFPCPECGRRFMQPVCLRVHLASHAGELPF
RCTHCPKAYGTLSKLKIHQRGHTGERPYACPDCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKD
LRNHERSHTGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPF
LCPRCGRMFSDPSSFRRHQRAHEGVKPYRCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKTFVASWD
LKRHALVHSGQRPFRCEECGRAFAERASLTKHSRMHSGERPFHCNACGKSFVVLSSLRKHERTHRSNETT
GAAPQQELVLGLALPVGVVGEGSAAPVAGAGVGDAPAGLLGLPPESGGVVATQWQVVGMTVEHVECQDAG
VGEAPSTLGDAGEVGGEETDEKPPQFVCRECKETFSTLTLLRRHERSHPELRPFPCTQCGKSFSDRAGLR
KHSRTHSSVRPYSCSQCPKAFLSASDLRKHERTHPVPIGTPIPLEPLVALLGMPEEGSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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