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Report for CCDS50698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50698.1 Public Mus musculus 2 Atp8b4 23 108 98 CCDS HistoryNCBI Gene:241633Re-query CCDS DB by CCDS ID:50698.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50698.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040128.11 ENSMUSP00000046444.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040128.11Link to Ensembl Protein Viewer:ENSMUSP00000046444.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000040128Re-query CCDS DB by Protein ID:ENSMUSP00000046444
Original member Current member EBI ENSMUST00000040149.12 ENSMUSP00000047302.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040149.12Link to Ensembl Protein Viewer:ENSMUSP00000047302.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000040149Re-query CCDS DB by Protein ID:ENSMUSP00000047302
Original member Current member NCBI NM_001080944.3 NP_001074413.2 Accepted alive Link to Nucleotide Sequence:NM_001080944.3Link to Protein Sequence:NP_001074413.2Re-query CCDS DB by Nucleotide ID:NM_001080944Re-query CCDS DB by Protein ID:NP_001074413Link to BLAST:NP_001074413.2
Original member Current member NCBI NM_001359975.1 NP_001346904.1 Accepted alive Link to Nucleotide Sequence:NM_001359975.1Link to Protein Sequence:NP_001346904.1Re-query CCDS DB by Nucleotide ID:NM_001359975Re-query CCDS DB by Protein ID:NP_001346904Link to BLAST:NP_001346904.1

Chromosomal Locations for CCDS 50698.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 126322810 126323091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126325275 126325405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126330862 126331000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126337377 126337622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126342955 126343038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126358016 126358239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126358768 126358951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126361756 126361903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126372165 126372270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126374484 126374595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126375666 126375830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126378713 126378828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126383661 126383849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126389241 126389406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126392802 126392848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126397588 126397796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126403191 126403387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126405308 126405396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126414287 126414445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126424148 126424230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126427357 126427427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126433873 126433945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126458243 126458304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126459636 126459734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126462608 126462721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126480628 126480686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 126489380 126489410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3585 nt):
ATGATGTTCTGCAATAAGAAGAAGCTACTTGAAGTGGAGCGGGTGGTGAAAGCCAATGACCGTGACTACA
ATGAGAAGTTCCAGTATGCGGACAATCGTATCCATACGTCCAAGTACAACGTTCTCACATTTTTGCCAAT
TAATTTATTTGAGCAGTTACAAAGAGTGGCAAATGCCTACTTTCTTTTCCTTCTGATACTACAGCTCATT
CCAGAAATCTCTTCCCTGACATGGTTCACCACCATTGTGCCACTGGTCCTGGTGATCTCGATGACGGCTG
TCAAGGATGCCACCGACGACTATTTCCGTCACAAGAGTGATAATCAAGTGAATAACCGGCAGTCTAAGGT
GCTCATCAATAGCAAACTGCAGAATGAAAAATGGATGAATGTTAAAGTTGGAGACATCATTAAATTAGAA
AACAACCAATTTGTCGCTGCTGACCTGCTGCTCCTGTCGAGCAGTGAGCCACACGGTCTCTGTTATGTTG
AAACAGCTGAGCTTGACGGGGAAACAAACCTGAAGGTTCGTCAGGCACTACCTGTCACCTCAGAACTTGG
AGCAGACATTAGCAGTCTTGCAGAGTTTGATGGGATCGTCAGGTGTGAGGCGCCTAACAACAAGTTAGAC
AGATTCTCGGGGGTCCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCTGAGAG
GCTGCGTCCTGAGGAACACCAGCTGGTGCTTTGGAATGGTTCTTTTTGCAGGTCCAGACACTAAACTAAT
GCAGAACAGTGGTAAGACAAAGTTTAAAAGGACAAGCATTGACAGACTGATGAATACCCTAGTCCTCTGG
ATTTTTGGGTTTCTGGTATGCTTGGGAATTATTCTTGCAGTAGGAAGTTCAATCTTGGAGAGTGAAGTTG
GGGACCAGTTCAGAACTCCCCCCTTCTGGAGAGAAGGCGAGAAGAGCTTCTTGTTCTCTGGATTCTTAAC
ATTCTGGTCATATGTCATCATTCTCAACACGCTTGTGCCCATTTCATTATATGTGAGTGTGGAAGTAATC
CGTCTGGGACACAGTTATTTTATAAACTGGGACCGGAAGATGTATTATGCTTCGAAAGCAATGCCTGCTG
AAGCCCGGACGACCACTCTAAATGAGGAACTGGGCCAGATCGAATATATCTTCTCTGACAAAACAGGAAC
TCTCACCCAAAACATCATGACTTTTAAAAAATGTTCCATTAATGGAAGAGTCTACGCAGGTGAAGTGCTA
GATGACCCAATCCAGAAGAAAGAAATAACTAAGGAAAAGGAGGCTACGGACTTCTCAAGCAAGTCGAAAT
CAGAAAAAACACTGCATTTCTTTGACCAGAGTCTAATGGAATCCATTGAGCTGGGGGACCCCAAAGTCCA
TGAATTCCTTCGCTTACTCGCACTCTGCCATACTGTAATGTCAGAAGAGAACAGTGCAGGACAACTGGTT
TACCAAGTTCAATCGCCTGATGAAGGAGCTCTAGTTACTGCTGCTAGAAATTTTGGGTTCATTTTTAAGT
CTCGAACTCCAGAGACAATTACAATAGAAGAATTGGGAACACCGGTGACTTATCAGTTACTTGCCTTTTT
GGATTTCAACAACATCCGGAAAAGGATGTCTGTCATAGTTCGAAACCCAGAAGGACGTATAAAACTTTAT
TCCAAAGGGGCAGATACTATTTTGTTTGAAAAGCTCCATCCTTCCAATGAAGACCTGCAGTCCTTAACAT
CAGACCATCTCAGCGAATTTGCAGGGGAAGGCCTCCGAACCTTGGCAATTGCTTATCGAGAGCTTGATGA
CAAGTACTTTAAAATGTGGCAGAAGATGCTTGAAGATGCAAATTCTGCCACCTTGGAAAGGGATGAACGG
ATATCTGGGCTGTATGAAGAAATCGAGAGGGATTTGATGCTATTAGGTGCCACCGCTGTCGAAGATAAAT
TACAAGAAGGTGTTATTGAAACAATTACAAGTCTCTCACTAGCCAATATTAAGATCTGGATTCTAACAGG
AGACAAACAAGAAACTGCCATCAATATCGGTTATGCCTGCAATGTGCTGACAGACGCCATGGATGCTCTA
TTTGTGATAACGGGGAACACGGCTGGGGAAGTGCGAGAAGAACTCAGGAAAGCAAAGGAAAATTTGCTTG
GACAAAGCACGAGTTTTTCCAATGGACATGCAGTTTATGACAACAAGCAGCGGTTGGGGTTGGACGCGGG
TGCAGGAGAGGCTGTGACAGGAGAATATGCCTTAGTCATAAATGGCCACAGTTTGGCCCATGCCCTTGAA
AGTGATGTCGAGAACGATCTTTTGGAGCTCGCCTGTGTGTGTAAGACTGTGGTTTGCTGCAGAGTCACCC
CACTCCAGAAAGCCCAAGTAGTAGAGTTGGTAAAAAAGCACAGAAATGCTGTGACTTTGGCCATTGGTGA
TGGGGCCAACGATGTCAGCATGATTAAAAGTGCCCACATTGGCATTGGCATCAGTGGTCAGGAAGGACTG
CAAGCAGTCTTAGCCAGTGACTATGCATTGGCTCAGTTTAGATATCTCCAACGACTGCTTCTTGTTCATG
GAAGGTGGTCCTACTACAGGATGTGCAAGTTCTTATGCTATTTCTTCTACAAGAACTTTGCGTTCACCCT
TGTGCACTTCTGGTTTGCCTTCTTCTGTGGCTTCTCGGCACAGACTGTCTACGACCAGTGGTTCATCACT
CTTTTTAACATTGTTTACACCTCACTACCCGTTTTAGCCATGGGAATGTTTGACCAGGACATAAATGAAC
AGAACAGCATGGACTATCCTCAGCTCTACGAACCTGGACAACTGAATCTCCTTTTTAACAAGCGCAGATT
TTTCATCTGTGTGGCACATGGAATCTACACCTCATTAGCCCTTTTCTTCATTCCCTACGGGGCCTTTTAC
AATGTGGCTGCAGAGGACGGGCAACACATTGCTGACCTCCAGTCCTTTGCAGTTACCGTGGCCACATCAT
TGGTCATTGTGGTCAGCATACAGATAGCCTTGGACACGAGTTACTGGACTGTGGTTAATCACGTCTTCAT
CTGGGGCAGTGTTGCCACCTATTTCTCCATTTTACTGGCCATGCACAGTGATGGTGTCTTTGGAATCTTC
CCACGCCATTTCCCCTTTGTTGGAAATGCACGGCACTCCCTGAGCCAGAAGTTTGTCTGGCTTGTGGTTC
TCTTGACAGCAGTGACGTCAGTCATGCCAGTGGTGGTGGTCAGATTTCTGAAGATGTATTTATACCCAAG
CCTGAGTGATCAGATCCGCCGGTGGCAGAAAGCTCAGCGAAAGAAAAGACCCCTGCGAAGCAGAAGGCCT
CAGACCCGCAGGTCGAGCTCTAGAAGATCTGGATACGCGTTTGCTCACCAGGAGGGCTACGGAGAGCTCA
TCACATCTGGAAAAAATATGCGAGCGAAAAGTCCAGCCCCAGCATCGGGGCTGGAAAAGAAGCTTTATAA
TAACACGAGCTGGATTGAAAATTTATGTAAGAAAACCACAGACGCGGTGAGCGGCTTTAGTCATGATAAG
ACAGTGAAATTGTGA

Translation (1194 aa):
MMFCNKKKLLEVERVVKANDRDYNEKFQYADNRIHTSKYNVLTFLPINLFEQLQRVANAYFLFLLILQLI
PEISSLTWFTTIVPLVLVISMTAVKDATDDYFRHKSDNQVNNRQSKVLINSKLQNEKWMNVKVGDIIKLE
NNQFVAADLLLLSSSEPHGLCYVETAELDGETNLKVRQALPVTSELGADISSLAEFDGIVRCEAPNNKLD
RFSGVLSWKDSKHALSNQKIILRGCVLRNTSWCFGMVLFAGPDTKLMQNSGKTKFKRTSIDRLMNTLVLW
IFGFLVCLGIILAVGSSILESEVGDQFRTPPFWREGEKSFLFSGFLTFWSYVIILNTLVPISLYVSVEVI
RLGHSYFINWDRKMYYASKAMPAEARTTTLNEELGQIEYIFSDKTGTLTQNIMTFKKCSINGRVYAGEVL
DDPIQKKEITKEKEATDFSSKSKSEKTLHFFDQSLMESIELGDPKVHEFLRLLALCHTVMSEENSAGQLV
YQVQSPDEGALVTAARNFGFIFKSRTPETITIEELGTPVTYQLLAFLDFNNIRKRMSVIVRNPEGRIKLY
SKGADTILFEKLHPSNEDLQSLTSDHLSEFAGEGLRTLAIAYRELDDKYFKMWQKMLEDANSATLERDER
ISGLYEEIERDLMLLGATAVEDKLQEGVIETITSLSLANIKIWILTGDKQETAINIGYACNVLTDAMDAL
FVITGNTAGEVREELRKAKENLLGQSTSFSNGHAVYDNKQRLGLDAGAGEAVTGEYALVINGHSLAHALE
SDVENDLLELACVCKTVVCCRVTPLQKAQVVELVKKHRNAVTLAIGDGANDVSMIKSAHIGIGISGQEGL
QAVLASDYALAQFRYLQRLLLVHGRWSYYRMCKFLCYFFYKNFAFTLVHFWFAFFCGFSAQTVYDQWFIT
LFNIVYTSLPVLAMGMFDQDINEQNSMDYPQLYEPGQLNLLFNKRRFFICVAHGIYTSLALFFIPYGAFY
NVAAEDGQHIADLQSFAVTVATSLVIVVSIQIALDTSYWTVVNHVFIWGSVATYFSILLAMHSDGVFGIF
PRHFPFVGNARHSLSQKFVWLVVLLTAVTSVMPVVVVRFLKMYLYPSLSDQIRRWQKAQRKKRPLRSRRP
QTRRSSSRRSGYAFAHQEGYGELITSGKNMRAKSPAPASGLEKKLYNNTSWIENLCKKTTDAVSGFSHDK
TVKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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