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Report for CCDS15722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15722.1 Public Mus musculus 2 Gpr158 23 108 98 CCDS HistoryNCBI Gene:241263Re-query CCDS DB by CCDS ID:15722.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15722.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055946.7 ENSMUSP00000049708.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055946.7Link to Ensembl Protein Viewer:ENSMUSP00000049708.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000055946Re-query CCDS DB by Protein ID:ENSMUSP00000049708
Original member Current member NCBI NM_001004761.1 NP_001004761.1 Accepted alive Link to Nucleotide Sequence:NM_001004761.1Link to Protein Sequence:NP_001004761.1Re-query CCDS DB by Nucleotide ID:NM_001004761Re-query CCDS DB by Protein ID:NP_001004761Link to BLAST:NP_001004761.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004761.1 1200 Q8C419 1200 100% 0 0

Chromosomal Locations for CCDS 15722.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 21368256 21369157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21399321 21399426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21553299 21553401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21576823 21577046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21648957 21649025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21746676 21746785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21783064 21783302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21810551 21810689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21815586 21815691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21825144 21825290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 21826236 21827693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3603 nt):
ATGGGAGCCATGGCTTACTCTTTACTCTTCTGCCTCCTGCTCGCTCATCTGGGATTGGGAGAGGTTGGTG
CCAGCCTCGACCCTCCGGGACGGCCAGATTCCCCTCGAGAGAGGACTCCGAGGGGGAAGCAGCATGGTCA
GCAGCTGCCGCGAGCCTCTGCCCCAGACCCCTCTATTCCCTGGAGCCGCTCCACTGACGGCACCATCTTG
GCACAAAAACTAGCCGAGGAGGTGCCCGTGGACGTGGCCTCTTACCTCTACACTGGGGACTTCCACCAGC
TGAAGAGAGCCAACTGCTCAGGCCGCTACGAGTTGGCTGGCCTGCCGGGAAAGTCACCGTCCCTAGCCAG
CTCCCATCCTTCCTTGCACGGGGCGCTGGACACTCTGACACACGCCACCAACTTCCTCAACATGATGTTG
CAGAGCAATAAGTCTCGGGAACAGACCGTGCAGGATGACCTGCAGTGGTACCAGGCTCTGGTGCGAAGTC
TCCTGGAGGGTGAGCCCAGCATCTCCCGGGCGGCCATCACCTTCAGCACCGAGTCGCTGTCCACGCCCGC
CCCGCAGGTCTTCCTCCAGGCCACCCGCGAGGAGAGTCGCATCCTGCTGCAGGACCTGTCCTCCTCCGCT
CACCACCTGGCTAACGCCACTCTAGAGACCGAGTGGTTCCATGGGCTTCGGCGAAAGTGGAGGCCCCACT
TGCACCGCCGTGGCTCCAATCAGGGGCCACGGGGCCTAGGCCACAGCTGGCGGCGCAGGGATGGGCTTGG
AGGGGACAGGAGCCACGTCAAGTGGTCCCCACCTTATCTGGAGTGCGAGAATGGGAGTTACAAGCCTGGG
TGGCTGGTCACGCTCTCTGCTGCCTTCTACGGGCTTCAACCTAACCTGGTCCCGGAATTCAGGGGTGTGA
TGAAAGTTGATATAAGCCTTCAGAAAGTGGACATTGACCAATGTTCGAGTGATGGCTGGTTTTCAGGAAC
TCACAAATGCCACCTTAACAACTCAGAGTGTATGCCAATCAAAGGCCTGGGATTCGTGCTTGGAGCCTAT
CAGTGCATTTGCAAAGCAGGGTTCTATCATCCCCGTGTCTTCTCAGTGAACAACTTCCAGAGAAGGGGTC
CAGATCACCATTTTTCAGGAAGCACAAAGGATGTGTCAGAAGAAACCCACGTCTGCCTGCCCTGCAGAGA
AGGCTGCCCCTTCTGTGCTGATGATCGTCCATGCTTTGTCCAGGAGGATAAATACCTGCGGCTCGCTATT
ATCTCTTTCCAAGCCCTGTGTATGCTGCTGGACTTTGTCAGCATGCTGGTGGTCTACCATTTTCGCAAAG
CAAAGAGCATCAGGGCATCTGGGCTCATCCTGTTGGAAACAATATTGTTTGGTTCTCTGCTCCTATACTT
TCCGGTCGTTATTCTGTACTTTGAGCCAAGTACATTTCGTTGTATTCTCCTAAGGTGGGCTCGTCTTCTT
GGTTTTGCTACTGTTTATGGAACTGTGACCCTCAAGCTTCACAGGGTTTTGAAGGTGTTCCTTTCACGAA
CAGCACAAAGAATCCCATACATGACTGGTGGTCGGGTCATGAGGATGCTGGCAGTAATAGTCTTGGTTGT
GTTTTGGTTTCTTGTTGGCTGGACTTCTTCTATGTGCCAGAATTTGGAGCGGGATATTTTGCTTGTTGGC
CAAGGGCAAACATCTGATCACCTCACCTTCAATATGTGCCTCATTGACCGCTGGGATTACATGACAGCAG
TTGCTGAATTTTTATTCCTCTTGTGGGGCATTTATCTCTGCTATGCAGTGCGGACTGTCCCTTCAGCATT
TCATGAGCCACGCTACATGGCTGTCGCAGTTCACAATGAGCTCATTATCACGGCTATATTCCATACAATT
AGATTCGTGCTCGCCTCGAGACTTCAGCCCGACTGGATGCTGATGCTGTACTTTGCACATGCTCACTTGA
CTGTGACAGTCACCATTGGGCTGCTTCTAATTCCAAAGTTTTCACATTCAAGCAATAATCCCCGAGATGA
CATTGCTACGGAAGCATATGAAGATGAGCTGGACATGGGTCGCTCTGGATCCTACCTGAACAGCAGTATC
AATTCAGCCTGGAGTGAACACAGCCTAGATCCAGAAGACATTCGGGATGAACTGAAAAAACTCTATGCTC
AGTTAGAAATATACAAACGTAAAAAGATGATCACAAACAACCCCCACCTTCAGAAAAAACGGTGCTCCAA
GAAGGGCTTAGGCCGGTCCATCATGAGGCGCATCACTGAGATCCCAGAGACAGTCAGCAGACAGTGCTCC
AAAGAGGACAAGGAAGGCACAGACCACAGTGCAGCCAAGGGGACAGGCCTTGTCCGGAAGAACCCTACTG
AGTCCTCAGGGAATACAGGGAGACCCAAGGAAGAGTCCCTTAAAAATCGGGTCTTCTCTCTCAAGAAATC
CCACAGCACATATGACCATGTGAGAGACCAAACTGTAGAATCCAGCAGCTTGCCCATGGAGAGCCAGGAG
GAGGAGGCCACCGAAAATTCAACCTTGGAGTCGCTGTCAAGTAAAAAACTGACACAAAAGCTCAAAGAAG
ATAGTGAGGCCGAGTCCACTGAGTCAGTGCCGTTGGTCTGCAAGTCAGCCAGTGCTCACAACCTCAGCTC
AGAGAAGAAGCCTGGGCACCCACGTACATCTATGTTACAGAAATCTCTCAGTGTCATTGCAAGTGCCAAG
GAGAAGACACTTGGCCTGGCTGGCAAAACCCAGACTTTAGTTATGGAAGACCGAGCTAAGTCCCAGAAAC
CAAAAGATAGAGAGACCATCAGGAAGTACTCAAATTCAGATAATGTAGAGACTATCCCAAACTCCGGTCA
CATGGAGGAGCCAAGAAAGCCCCAGAAATCTGGGATTATGAAACAGCAGAGGGTCAGCCTCCCCACTGCC
AATCCTGACGTGAGCTCCGGTATCACCCAGATAAAGGACAATTTTGATATCGGAGAAGTATGCCCTTGGG
AGGTTTATGACCTGACCCCTGGTCCTATGCCTTCAGAGCCAAAAGCTCAAAAACACGTATCAATCGCAGC
TTCTGAAGTGGAACAAAACCCTGCTTCGTTTTTGAAGGAGAAGTCCTACCACAAGTCTAAGGCAACTGAA
GGTCTCTACCAAGCCAATCACAAGAGCATAGACAAGACAGAGGTGTGCCCCTGGGAAATCCACAGTCAGT
CCCTTTTAGAAGATGAGAATCGTCTGATTTCTAAGACTCCAGTTCTCCCAGGGAGAGCCAGAGAGGAGAA
TGGAAGCCAGCTCTACACAACCAATATGTGTGCTGGGCAATATGAAGAACTGCCCCACAAAGTCGTAGCA
CCAAAAGTAGAGAATGAAAATCTCAACCAAATGGGAGACCAGGAGAAACAGACATCTTCCTCTGTGGATA
TCATTCCTGGCTCCTGTAACTCAAGTAATAACTCCCATCAGCCCTTAACATCACGAGCCGAAGTGTGTCC
CTGGGAGTTCGAGCCCCTAGAACAACCAAATGCTGAAAGAAGCGTAACTTTACCTGCCTCCTCTGCTTTA
AGTGCAAATAAGATACCAGGGCCTCAGAAATAG

Translation (1200 aa):
MGAMAYSLLFCLLLAHLGLGEVGASLDPPGRPDSPRERTPRGKQHGQQLPRASAPDPSIPWSRSTDGTIL
AQKLAEEVPVDVASYLYTGDFHQLKRANCSGRYELAGLPGKSPSLASSHPSLHGALDTLTHATNFLNMML
QSNKSREQTVQDDLQWYQALVRSLLEGEPSISRAAITFSTESLSTPAPQVFLQATREESRILLQDLSSSA
HHLANATLETEWFHGLRRKWRPHLHRRGSNQGPRGLGHSWRRRDGLGGDRSHVKWSPPYLECENGSYKPG
WLVTLSAAFYGLQPNLVPEFRGVMKVDISLQKVDIDQCSSDGWFSGTHKCHLNNSECMPIKGLGFVLGAY
QCICKAGFYHPRVFSVNNFQRRGPDHHFSGSTKDVSEETHVCLPCREGCPFCADDRPCFVQEDKYLRLAI
ISFQALCMLLDFVSMLVVYHFRKAKSIRASGLILLETILFGSLLLYFPVVILYFEPSTFRCILLRWARLL
GFATVYGTVTLKLHRVLKVFLSRTAQRIPYMTGGRVMRMLAVIVLVVFWFLVGWTSSMCQNLERDILLVG
QGQTSDHLTFNMCLIDRWDYMTAVAEFLFLLWGIYLCYAVRTVPSAFHEPRYMAVAVHNELIITAIFHTI
RFVLASRLQPDWMLMLYFAHAHLTVTVTIGLLLIPKFSHSSNNPRDDIATEAYEDELDMGRSGSYLNSSI
NSAWSEHSLDPEDIRDELKKLYAQLEIYKRKKMITNNPHLQKKRCSKKGLGRSIMRRITEIPETVSRQCS
KEDKEGTDHSAAKGTGLVRKNPTESSGNTGRPKEESLKNRVFSLKKSHSTYDHVRDQTVESSSLPMESQE
EEATENSTLESLSSKKLTQKLKEDSEAESTESVPLVCKSASAHNLSSEKKPGHPRTSMLQKSLSVIASAK
EKTLGLAGKTQTLVMEDRAKSQKPKDRETIRKYSNSDNVETIPNSGHMEEPRKPQKSGIMKQQRVSLPTA
NPDVSSGITQIKDNFDIGEVCPWEVYDLTPGPMPSEPKAQKHVSIAASEVEQNPASFLKEKSYHKSKATE
GLYQANHKSIDKTEVCPWEIHSQSLLEDENRLISKTPVLPGRAREENGSQLYTTNMCAGQYEELPHKVVA
PKVENENLNQMGDQEKQTSSSVDIIPGSCNSSNNSHQPLTSRAEVCPWEFEPLEQPNAERSVTLPASSAL
SANKIPGPQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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