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Report for CCDS39609.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39609.1 Public Mus musculus 6 Ankrd26 23 108 98 CCDS HistoryNCBI Gene:232339Re-query CCDS DB by CCDS ID:39609.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39609.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112830.2 ENSMUSP00000108449.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112830.2Link to Ensembl Protein Viewer:ENSMUSP00000108449.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112830Re-query CCDS DB by Protein ID:ENSMUSP00000108449
Original member Current member NCBI NM_001081112.2 NP_001074581.1 Accepted alive Link to Nucleotide Sequence:NM_001081112.2Link to Protein Sequence:NP_001074581.1Re-query CCDS DB by Nucleotide ID:NM_001081112Re-query CCDS DB by Protein ID:NP_001074581Link to BLAST:NP_001074581.1

Chromosomal Locations for CCDS 39609.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 118503023 118503156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118505726 118505771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118506376 118506604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118507638 118507852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118508490 118508780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118511566 118511695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118515781 118515893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118517896 118517989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118518341 118518411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118521841 118521993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118522939 118523895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118524945 118525082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118525733 118525916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118527656 118527869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118529434 118529575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118529843 118529876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118532202 118532369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118533315 118533466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118535079 118535143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118539686 118539764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118539847 118539875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118540451 118540549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118542890 118542983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118548314 118548375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118548830 118548959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118549386 118549537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118549638 118549698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118551969 118552041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118552746 118552779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118554204 118554265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118556196 118556302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118558938 118559111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118559271 118559385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118561813 118562057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5046 nt):
ATGAAGAAGATTTTTGGCTTCAGGAGTAAGGGCCCATCGCCCTTAGGCCCCTCTGCCCGCCCGCGCAGCA
ACTGCGTGGGCTTTGGACGCGAGAGTGCTAGTGGCTCCCACGTGCCCAGGTACCATATTCACGACAAGGA
TATGGGCAAGATCCACAAGGCTGCAAGCGTGGGAGATGTAGCCAAAGTGCAGCATATCCTTATCCTTGGA
AAAAGTGGCGTGAACGATAGAGACAAGAAGGACAGGACTGCTCTACATCTTGCCTGTGCTTACGGCCACC
CAGAAGTGGTGACTCTCTTAGTAGAGAGAAAATGTGAGATAGATGCCCGTGACAGCGAGAGCAGCACGGC
CCTCATTAAGGCCGTGCAGTGCCAGGAGGAAGAATGTGCAGCCATACTGCTGGACCACGGGGCCGATCCA
AATGTGATGGACAGCAGCGGCAACACCGCCCTCCACTACGCGGTCTACAGTGAGAACACGTCCATGGCAG
CCAAACTGCTCGCACACAATGCAAACATAGAAGCCAAAAACAAGGATGACCTAACACCTATGTTACTTGC
TGTAAAGGAAAATAAACAACATATTGTGGAATTTTTAGTAAAGAAGAAAGCAAGTATTCACGCAGTTGAT
CAGCTTGGAAGCAACAGGCAAATGTTTGAATATGATGGGAAGAGACTACAAAGATCTGAAAACAGCAATC
CAGTGGATAATGGTTCTGAAGATGGCTCTTTAACCAGGTCTTATAACACACCTGGCCCTGCTGATTCCTG
GCCGACATCAGATGAGGAGGACTATAACTTTGACAACAAGAATGTCCCCAAAATTAATTTGACAGAGTTG
TGGACAGCTGCTCAGCAGTCTAGGAAAAACCAAACAAAATGTGGCTTTGAGGAGCTAGACAATGGAGCCC
GGTTTGATGACAGTGATTCCCCTAGTGAAAGTGAAGATGCCATTGAGGTTGAGCCTGCGCCATCAGTCAG
AGTCCAGACCCTCTCCCCATCCCGTCAGTCACCTGACCCTGTGGAAGGAGCAACCGAGCTAGCAATTGAA
GGAGAAGAAAACGGTACTGATGTTATTGAGAGCGCTTCACAGGAGCAACCAAATCATGACAATTTAACCC
GTGCTGATGGTTGGCACAAAAGTAATAAAAGTGAAATGATGTCTGCATTAGGATTAGGAGAAGACGAAGA
TGAACACTCGCCTTGGGATTCTGAGAGTATCTCCGAGAGTGTGTCACTGAAAGACGTAGGTCACTTCTCT
GGGACTGCAGATCAAACGGGAAAAAGGAGAGCACATGGACAGATAGAAGATGTGACTTATATACCTTCTT
GCATGAGTGGATCAAGAAGCTTTAAAATGGCTAAACTAGAGGAGTCAAGAAATGTAGGCCTTCCGGTAGC
CCACATGGAGGCCCCCAGGAAATATGCAATCATGGAGCCTACCATCGAAAGGAGGGCTCCTGTTCTGAAC
AAAACGGAGACAGTGGGAATGACGGATGCACAGACTTTCAAGTCAGAGCCAGAATCAGTATCAAGAGAAG
AACAGACAAGGCTCAGTGGCAGCGAGGACAGCCAGCAGAAGGTTGAAGAAAAGAGAAAATACAAAAATAA
CGAAGCAGAACCCTCAGGAAATCTATACAGCGGTGCTGCTGACGGCGGTGCTGATGTAAAGCCACAGAGT
GGAGACACTGAGAACCAGCAGTCTCCCCGGGAGGGGAGTGAGGGACGTGGCAGTGGTCCTGCCTTGCTTA
TGAAGGAAGCAAAGAAAATGGAAAATGAAAAATGGGTATCCAGAGAGCCCGCGAGGACGGCAATGAGTGA
GCGCACCGGCTTACCAACTGGTGGCTGGCCACAAATGCAGGATGGTTCCTGCTGGAGTGACACGGACCAA
AGTGAAGCCAGGCCCACAAAGAAAACATCTAGTAAACATAACAAGGACAGCGGGCAGACAGCTGCAGTGG
ACAACCTTGACGACTTTACTGAGTCGTCTGAAACAGCCTCTGAGGACCATGAGCTCCAGGGCCCTGATTC
CGAGAGCATTTTGTGTGCGATCGAGCATCTCAGACTGGAGTGTAAAGATACTGCTAGTCTATTGAAAATC
CGGGATGCCGTTTATTCATATAAACGATTAATAGAACTTAAAAGAAGCCACTGTGAACTACTTACAGGAA
AACTGAAAAGAATGGAAAACAAATATAAGGGATTGCAGAAGGAAATGTCAGAGACAGAAGAAGTGAAGTC
ACGGTTGGAACATGAAAAGGTCGGATGGGAACAGGAGCTCTGCAGGCTGAGATTTGCACTGAAACAAGAG
GAAGAGAAGAGGAGGAGTGCAGACCAGCTTTCTGAGAAAACCTCGGAGCAGCTTAGAAGGAAAGGCGAGC
AGTGTCAGAGTGAGGTGGAAGCCAGGCAGCAGCTTGAAGCCTCTCTCAGAACCCTGGAGATGGAGCTGAA
GACGGTGAAAAGCCATCTCAACCAGGTCTTAGAGGAACGAAATGAGACTCAGAGGCAGCTCTCCCGAGAA
CAGAATGCCAGAATGTTACAAGATGGGATTCTTGCAAGTCACCTCTGCAAGCAAAAGGAGATAGAAATGA
CGCAGAAGAAAATGACTTCTGAGGTTTCTGTTAGTCATGAAAAAGAAAAAGATCTATTGCATAAAAACCA
GAGGCTGCAGGATGAAGTTGCTGTGTTACGACTGGAAATGGACACAATAAAAAGCCATAACCAGGAGAAG
GAAAAGAGGTATCTTGAGGATATTAAGATTGCAAATGAGAAGAATGACAACCTTCAAAGGATGGTCAAGC
TGAATGAAGAAACATTTACAAAAACCATATTCCAGTATACTGGACAGCTTAATAGTCTTAAAGCTGAGAA
CACAATGCTGAGTTCTAAGCTGGACAACGAAAAACAAAATAAGGAGAGACTGGAAACAGACGTTGAGTCG
TTCCGATCTAGGCTGGCTTCTGCTCTGCATGATCACGCTGAAATTCAGACAGCAAAAAGAGACCTAGAAA
TTGCTTTCCAGAGAGCGAGAGATGAGTGGTTTCGTGTGAAAGACAAGATGAATTTCGATATGTCTAACCT
CCGAGATAACAATGAGGTTCTCTCCCAACAGCTTTCTAAAACTGAAAGGAAGTTGAATAGCCTAGAAATT
GAGTTTCATCACACGAAAGATGAGCTTCGAGAGAAGACGCTGGCGTTAAAGCATGCGCAGAGAGACCTGA
GCCAGACCCAGTGCCAGATGAAGGAGGTGGAGCACATGTTTCAGGACGAACAAGGCAAAGTGAGCAAGTT
CATGGGGAAGCAGGAGTCCATAGAGGAGAGGCTGGCCCAGCTGCAGAGTGAGAACACGCTGCTCCGGCAG
CAGCTGGACGACGCTGCCAACAAGGCCGAGAGCAAAGACAAGACCATAGTCAACATCCAAGACCAGTTCC
AGGATGTGCTAACCAGGTTCCAAGCTGAGAGTCAGCGGCACAGCCTGAGGCTAGAAGACAGAAACCAGGA
GTTAGTCAGTGAGTGCAGCCATCTAAGAGAAAGACTGTGTCAGTACGAGAACGAGAAAGCCGAAAGAGAG
GTAGTTGTGAGGCAACTCCAGCAAGAATTGGCTGATACCCTAAAAAAGCAGTCGATGTCAGAGGCTTCGC
TGGAAGTCTCCTCCCGCTACCGCAGCAATTTAGAAGAAGAGGCGCGAGACTTAAAGAAGAAATTAGGTCA
GCTCAGAAGTCAGTTGCAGGAGGCGCGGGATCAACACAGAGAGGCTGTACACCATGCTGAGAAGATGGAA
GACCACCTACAAAAGCTTGAACTTGAAAAATCCAAGTTCGAAATTACAATTAAAAAGCAATCAGAGGAAA
TTGATCAACTTCAGGAAAACCTGTCAAGGGTGAATTTGTCTGAAGAGGATAAGGAAAAACTGCAGAAACT
TACCGAGTTGAAGGAGTCTCTGGAATGTACTGTGGATCAAGAACAGAAGAGAAGCAGTGCGTTAGAAAAA
GAACTGGCAGAATTTAAGGAAGTCTTAAAAATGACCAAAAAAGAATTAAATGAATATGAAAACAGAGAAC
TTAATCTTCGTCAAGATATAAAAAACAATCACCTTGAAATGGATATCCCAGTTAGTACACTAATAAAAAA
GATTGATGATCTTACAGCAAAACTGGAAACTGCATCTTCAAAATGTCTACATCTGGGTAAAAAAAATCAG
CTGCTTCAGCAGGAGTTACTATTGATGAGGACTATACAAAAGAAGTGTGGGAAACTAGAGAAGAATAAAA
AGCAATTGGAGCAGGAGGTCGTGAACCTCAGAAGTCACATGGAGAAGAACATGGTGGAGCACAGCCAAGC
ACAGCAGTACGCGCGGGAGGTCGAAGAGCGAGCGAGGCAGGACTTGGTGGAAAAGTTAAAACAGGTCAAC
CTCTTCCTGCAGGCTCAAGCAGCATCCCAGGAGAGCTTGGAGCAGTTAAGAGAGAACAGTAACGCTTCGG
TTAGAAGTCAGATGGAGCTCAGGATTAAAGACCTGGAGTCCCAGCTCTACAGAATGAAAGCCCAGGAAGA
CTTCGATAAAATAGAACTGGAAAAGTATAAGCAGCTCTACCAGGAAGAGTTCAGAGCTAGAAAATCGCTG
TCAAGTAAACTAAACAAGACCAGTGAGAAGCTGGAGGAGGCCAGCAGCAAGCTGCTCCTGGAGGAGCAGC
AGAACAGGTCCTTGCTGAGCACTCTGAGTACAAGGCCTGTTGTGGAGTGTCCTTGTGTTGGAAGTTTCCA
TAATAGTTTGGTATTCAACAGAACTCTTATTCCAAGAGAAAACATAGTGGTTCCTACTTCAGGCCTACAG
CCATCAAATAAGAGAGTGGAGATCTACCTGACCAAGATGCATCAAGAGTTGGAAAAAAGTATAAATAGAG
AACTTAAAGAAGCTACTGCTGAACTTGAATCTGAGTTCTGCAGAGTTTCTCCCCTGGGATCTGCTACTAA
AGCAAGCCAAGATCAACTCTCAGACGCATCGCAAGAATTTATAGACATTCTAAAGAAAAAATATATGATC
TGCTGA

Translation (1681 aa):
MKKIFGFRSKGPSPLGPSARPRSNCVGFGRESASGSHVPRYHIHDKDMGKIHKAASVGDVAKVQHILILG
KSGVNDRDKKDRTALHLACAYGHPEVVTLLVERKCEIDARDSESSTALIKAVQCQEEECAAILLDHGADP
NVMDSSGNTALHYAVYSENTSMAAKLLAHNANIEAKNKDDLTPMLLAVKENKQHIVEFLVKKKASIHAVD
QLGSNRQMFEYDGKRLQRSENSNPVDNGSEDGSLTRSYNTPGPADSWPTSDEEDYNFDNKNVPKINLTEL
WTAAQQSRKNQTKCGFEELDNGARFDDSDSPSESEDAIEVEPAPSVRVQTLSPSRQSPDPVEGATELAIE
GEENGTDVIESASQEQPNHDNLTRADGWHKSNKSEMMSALGLGEDEDEHSPWDSESISESVSLKDVGHFS
GTADQTGKRRAHGQIEDVTYIPSCMSGSRSFKMAKLEESRNVGLPVAHMEAPRKYAIMEPTIERRAPVLN
KTETVGMTDAQTFKSEPESVSREEQTRLSGSEDSQQKVEEKRKYKNNEAEPSGNLYSGAADGGADVKPQS
GDTENQQSPREGSEGRGSGPALLMKEAKKMENEKWVSREPARTAMSERTGLPTGGWPQMQDGSCWSDTDQ
SEARPTKKTSSKHNKDSGQTAAVDNLDDFTESSETASEDHELQGPDSESILCAIEHLRLECKDTASLLKI
RDAVYSYKRLIELKRSHCELLTGKLKRMENKYKGLQKEMSETEEVKSRLEHEKVGWEQELCRLRFALKQE
EEKRRSADQLSEKTSEQLRRKGEQCQSEVEARQQLEASLRTLEMELKTVKSHLNQVLEERNETQRQLSRE
QNARMLQDGILASHLCKQKEIEMTQKKMTSEVSVSHEKEKDLLHKNQRLQDEVAVLRLEMDTIKSHNQEK
EKRYLEDIKIANEKNDNLQRMVKLNEETFTKTIFQYTGQLNSLKAENTMLSSKLDNEKQNKERLETDVES
FRSRLASALHDHAEIQTAKRDLEIAFQRARDEWFRVKDKMNFDMSNLRDNNEVLSQQLSKTERKLNSLEI
EFHHTKDELREKTLALKHAQRDLSQTQCQMKEVEHMFQDEQGKVSKFMGKQESIEERLAQLQSENTLLRQ
QLDDAANKAESKDKTIVNIQDQFQDVLTRFQAESQRHSLRLEDRNQELVSECSHLRERLCQYENEKAERE
VVVRQLQQELADTLKKQSMSEASLEVSSRYRSNLEEEARDLKKKLGQLRSQLQEARDQHREAVHHAEKME
DHLQKLELEKSKFEITIKKQSEEIDQLQENLSRVNLSEEDKEKLQKLTELKESLECTVDQEQKRSSALEK
ELAEFKEVLKMTKKELNEYENRELNLRQDIKNNHLEMDIPVSTLIKKIDDLTAKLETASSKCLHLGKKNQ
LLQQELLLMRTIQKKCGKLEKNKKQLEQEVVNLRSHMEKNMVEHSQAQQYAREVEERARQDLVEKLKQVN
LFLQAQAASQESLEQLRENSNASVRSQMELRIKDLESQLYRMKAQEDFDKIELEKYKQLYQEEFRARKSL
SSKLNKTSEKLEEASSKLLLEEQQNRSLLSTLSTRPVVECPCVGSFHNSLVFNRTLIPRENIVVPTSGLQ
PSNKRVEIYLTKMHQELEKSINRELKEATAELESEFCRVSPLGSATKASQDQLSDASQEFIDILKKKYMI
C


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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