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Report for CCDS16200.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16200.1 Public Mus musculus 2 P2rx3 23 108 98 CCDS HistoryNCBI Gene:228139Re-query CCDS DB by CCDS ID:16200.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16200.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028465.13 ENSMUSP00000028465.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028465.13Link to Ensembl Protein Viewer:ENSMUSP00000028465.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000028465Re-query CCDS DB by Protein ID:ENSMUSP00000028465
Original member NCBI NM_145526.2 NP_663501.2 Updated not alive Link to Nucleotide Sequence:NM_145526.2Link to Protein Sequence:NP_663501.2Re-query CCDS DB by Nucleotide ID:NM_145526Re-query CCDS DB by Protein ID:NP_663501
Current member NCBI NM_145526.3 NP_663501.2 Accepted alive Link to Nucleotide Sequence:NM_145526.3Link to Protein Sequence:NP_663501.2Re-query CCDS DB by Nucleotide ID:NM_145526Re-query CCDS DB by Protein ID:NP_663501Link to BLAST:NP_663501.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663501.2 397 Q3UR32 397 100% 0 0

Chromosomal Locations for CCDS 16200.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 84999013 84999126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84999606 84999683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85000324 85000389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85000657 85000750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85021729 85021865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85022348 85022489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85023154 85023231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85023483 85023576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85024110 85024173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85024382 85024453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85024856 85024991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85035181 85035299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1194 nt):
ATGAACTGTATATCAGACTTCTTCACCTACGAGACTACCAAGTCGGTGGTTGTGAAAAGCTGGACCATTG
GGATCATCAACCGAGCCGTTCAGCTGCTGATTATCTCCTACTTTGTGGGGTGGGTTTTCTTGCACGAGAA
GGCCTACCAAGTGCGGGACACGGCCATTGAGTCCTCAGTAGTAACAAAGGTAAAAGGCTTCGGACGCTAT
GCCAACAGAGTCATGGATGTGTCGGATTATGTGACCCCACCCCAGGGCACTTCTGTCTTTGTCATCATCA
CCAAAATGATCGTTACTGAAAATCAAATGCAAGGATTCTGTCCAGAGAATGAGGAGAAGTACCGCTGTGT
GTCTGACAGCCAGTGTGGGCCTGAGCGCTTCCCGGGTGGGGGGATCCTCACCGGCCGCTGCGTGAACTAC
AGCTCTGTCCGTCGGACCTGTGAGATCCAGGGCTGGTGCCCCACCGAGGTGGACACCGTGGAGATGCCTA
TCATGATGGAAGCCGAGAACTTCACCATTTTCATCAAGAACAGCATCCGTTTCCCTCTCTTCAACTTTGA
GAAGGGAAACCTCCTTCCTAACCTCACCGACAAGGACATAAAGAAGTGCCGCTTCCATCCTGAAAAGGCC
CCATTTTGCCCCATCTTGAGGGTAGGGGACGTGGTTAAGTTTGCTGGGCAGGATTTTGCCAAGCTGGCCC
GCACGGGTGGAGTTCTGGGCATTAAGATCGGCTGGGTGTGTGATCTGGACAAGGCCTGGGACCAGTGCAT
TCCCAAATATTCCTTCACTCGGCTAGATGGAGTTTCTGAGAAAAGCAGTGTTTCCCCTGGCTACAACTTC
AGGTTTGCCAAATACTACAAGATGGAGAATGGCAGCGAGTACCGCACGCTCCTGAAGGCTTTCGGCATCC
GCTTTGATGTGCTGGTATACGGGAACGCTGGCAAGTTCAACATCATTCCCACCATCATCAGCTCGGTGGC
TGCCTTCACTTCCGTGGGAGTGGGGACTGTTCTCTGTGACATCATCCTGCTCAATTTCCTCAAAGGGGCT
GATCACTACAAAGCCAGGAAGTTTGAGGAGGTGACTGAGACAACACTGAAGGGTACTGCTTCAACCAACC
CAGTGTTCACCAGTGACCAGGCCACTGTAGAGAAGCAGTCCACAGACTCGGGGGCCTATTCTATTGGTCA
CTAG

Translation (397 aa):
MNCISDFFTYETTKSVVVKSWTIGIINRAVQLLIISYFVGWVFLHEKAYQVRDTAIESSVVTKVKGFGRY
ANRVMDVSDYVTPPQGTSVFVIITKMIVTENQMQGFCPENEEKYRCVSDSQCGPERFPGGGILTGRCVNY
SSVRRTCEIQGWCPTEVDTVEMPIMMEAENFTIFIKNSIRFPLFNFEKGNLLPNLTDKDIKKCRFHPEKA
PFCPILRVGDVVKFAGQDFAKLARTGGVLGIKIGWVCDLDKAWDQCIPKYSFTRLDGVSEKSSVSPGYNF
RFAKYYKMENGSEYRTLLKAFGIRFDVLVYGNAGKFNIIPTIISSVAAFTSVGVGTVLCDIILLNFLKGA
DHYKARKFEEVTETTLKGTASTNPVFTSDQATVEKQSTDSGAYSIGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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