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Report for CCDS15932.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15932.1 Public Mus musculus 2 Cfap157 23 108 98 CCDS HistoryNCBI Gene:227736Re-query CCDS DB by CCDS ID:15932.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 15932.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102813.1 ENSMUSP00000099877.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102813.1Link to Ensembl Protein Viewer:ENSMUSP00000099877.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000102813Re-query CCDS DB by Protein ID:ENSMUSP00000099877
Original member Current member NCBI NM_025619.1 NP_079895.1 Accepted alive Link to Nucleotide Sequence:NM_025619.1Link to Protein Sequence:NP_079895.1Re-query CCDS DB by Nucleotide ID:NM_025619Re-query CCDS DB by Protein ID:NP_079895Link to BLAST:NP_079895.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079895.1 523 Q0VFX2 523 100% 0 0

Chromosomal Locations for CCDS 15932.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32777498 32777569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32777828 32778017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32778117 32778283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32778947 32779097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32779290 32779420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32779709 32779976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32780642 32780795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32781354 32781625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32784221 32784387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGCTCCAAAAAAGAAGCCAAACAAAGGAGGCAAGGAGATGCAGGGCAAGAAGATAGGGGGCAAGAAGG
ATGCCAGTGGGACCAAGACTCCAGAGTTGGCCATGGTGGAGGAGCTGAAGGAATTCTACCACAAACAGAT
CCAAGACCTGGAGGACAGGCTGGCCCGGTATCAGCGGAAATGGGATGAACTGGCTGTGCGGGAGAAGCTG
TTCCATCAGGAGTTCGAGCAGCTGGCCAACAACAAGAAGGAGATTGTGGCCTTCCTCAAGCGCACGCTGA
ACCAGAAGGTGGATGAGATCACAGACCTTAATGACCAGCTGCAGAGCCTGGAGGTGGCCAAGGATATGGA
GAAGGACGCGTTCGAGGCCCAACTGGCCCAGGTGCGCCATGAATTCCAGGAAATCAAGGACCAGCTCACC
ACAGAGAACATCGCCCTCGGGATCAAGCTGAGTTCCCTGGAAGAATTCCGGCTGCAGAAAGAGGAGCTCA
CGGAGAAGTACTTGGCACTGGAGGAGCAGCTCCATAGGCAGGAGGGCGAGTACAAGGAATACGTGTACAA
CCTGGAGAAGAAGTCTGTGCTGGACAAGGACAGGCTGAGGAAAGAGATTATCCAGCGTGTGAACCTGGTG
GCCACAGAGTTCCGAAAGATGGCCACCAACCAGATGTGGGAGACGACCAGGCGGGCCATCCTAGAGAACA
ACAGCGTGACTCTGCAGCTAAACAAGGTGTCCAAGCATGGTGTGCAGCTGCTGCAGGAGAATGAGCAGCT
CAAGGGCACCCAGAACAAGCTGTGCCAACAGCTGGAGATGCTGGAGAACACCCAAGAGATCATGGCCAGA
AAGAACATAGGGCATAAGAAGATTATCCTCATGCTGACCGAGAAGTGCCGCCAACAGAGAAAGGGCACAG
AGGAGACGGAGCAACTGCGCCTCCTGCTGTCCCAACTGGAGCAGAACTTCCAGAATGTGCAGAGGGACAA
CCAGACCCTGAGGAGTGAGAAAGACCAGCTGGAAGCGCAACTGAAGGAGAAGCAGGCAGAGGCAAATCGG
CTACAGGAGGAGCTGACCAAGGAACAGAAAATTCGGGCAAACCTTAAAACAGTCCTGATCCAGGCGACCT
CCATGCTACAGGACATTGTGCACATGCAAACAGAGGCGGAGGACGGCGACTTTGATGTGGTGTTCCAACT
GCAGCGCAAGGAGCTGCTGCAGCAACTGCTGGTATTGCTCAGCTCAGGGGTGGTTTTGAAAACACAGCCG
GACATGGGTTCCCACCAGGACAAGCAGCCCCAGGGCCTATCCAAAGAAAGCCAACGCATCACCCAGACAT
CCAAGGAAGGGGCTGTTTCTCTGCTGCAGCAGCTCTCGACCATCACAACCTATAAGCCAGGGGATCTTGG
GCTGGTGCCTCGACGTCCGGTCCGCATCCCACTCAAACCCCAGGATCTCAGGCCCCTCTCCTATATCACC
CGAATGGGGATCTGCCAGAACACGAATGAGATCTACCCATCTGGAGCTCTCAAAAGGTTCAGAAAGTTTA
CCCTTCCTAGACCTTTCCTACACCGCAAATAG

Translation (523 aa):
MAPKKKPNKGGKEMQGKKIGGKKDASGTKTPELAMVEELKEFYHKQIQDLEDRLARYQRKWDELAVREKL
FHQEFEQLANNKKEIVAFLKRTLNQKVDEITDLNDQLQSLEVAKDMEKDAFEAQLAQVRHEFQEIKDQLT
TENIALGIKLSSLEEFRLQKEELTEKYLALEEQLHRQEGEYKEYVYNLEKKSVLDKDRLRKEIIQRVNLV
ATEFRKMATNQMWETTRRAILENNSVTLQLNKVSKHGVQLLQENEQLKGTQNKLCQQLEMLENTQEIMAR
KNIGHKKIILMLTEKCRQQRKGTEETEQLRLLLSQLEQNFQNVQRDNQTLRSEKDQLEAQLKEKQAEANR
LQEELTKEQKIRANLKTVLIQATSMLQDIVHMQTEAEDGDFDVVFQLQRKELLQQLLVLLSSGVVLKTQP
DMGSHQDKQPQGLSKESQRITQTSKEGAVSLLQQLSTITTYKPGDLGLVPRRPVRIPLKPQDLRPLSYIT
RMGICQNTNEIYPSGALKRFRKFTLPRPFLHRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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