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Report for CCDS22733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22733.1 Public Mus musculus 8 Zfpm1 23 108 98 CCDS HistoryNCBI Gene:22761Re-query CCDS DB by CCDS ID:22733.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22733.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054052.14 ENSMUSP00000058037.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054052.14Link to Ensembl Protein Viewer:ENSMUSP00000058037.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000054052Re-query CCDS DB by Protein ID:ENSMUSP00000058037
Original member Current member NCBI NM_009569.4 NP_033595.1 Accepted alive Link to Nucleotide Sequence:NM_009569.4Link to Protein Sequence:NP_033595.1Re-query CCDS DB by Nucleotide ID:NM_009569Re-query CCDS DB by Protein ID:NP_033595Link to BLAST:NP_033595.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033595.1 995 O35615 995 100% 0 0

Chromosomal Locations for CCDS 22733.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 122282483 122282522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122305358 122305480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122307492 122307641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122323700 122323833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122332090 122332189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122333721 122333927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122334452 122334682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122334932 122335027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122335113 122335259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 122335432 122337191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2988 nt):
ATGTCCAGGAGGAAACAGAGCAATCCCCGGCAGATCAAGCGTTCCCTCAGAGACATGGAGGCCGGAGAAG
AAGCCAAGGCCATGGACAGCAGCCCCAAGGAGCAGGAAGCCCCAGACCCAGAGGCCCCAGCCATAGAGGA
GCCCCCAAGTCCACCCAGAGAAGATGTGAGCCCACCTGCAGTGCCGGCACCTCCGGAGTCCCCAGAAGAT
CCTGAGGACATGGAGGGGCAGGAGTTGGAGATGAGGCCCCAGGATGAAGAGAAAGAGGAAAAGGAAGAAG
AGGCAGCCATGGCTAGTCCCTGGAGTGGGCCAGAGGAGCTGGAGCTGGCACTGCAGGATGGGCAGAGGTG
CGTGCGCGCCCGGCTGAGCCTCACTGAGGGCCTATCCTGGGGCCCATTCTACGGGAGCATCCAGACCAGA
GCCTTATCCCCTGAGAGAGAAGAACCGGGCCCAGCTGTGACCCTGATGGTGGATGAGAGCTGCTGGCTAA
GGATGCTGCCCCAGGTCCTAACTGAAGAAGCCGCCAACTCAGAGATCTACAGGAAGGATGACGCCCTCTG
GTGCAGGGTTACCAAAGTGGTGCCTTCTGGTGGACTGCTATATGTGCGCCTTGTCACCGAGCCCCATGGT
GCTCCCAGACACCCTGTGCAGGAACCAGTAGAACCTGGAGGCTTGGCCCCAGTGCACACCGACATCCAGC
TGCTGCCCCAGCAGGCTGGCATGGCATCCATCCTTGCTACCGCAGTCATCAACAAGGACGTCTTCCCCTG
CAAAGACTGCGGGATCTGGTACCGTAGTGAGCGGAACCTGCAAGCCCACCTGCTCTACTACTGTGCCAGC
CGCCAGCGTGCAGGCTCTCCTGTCTCGGCGACGGAAGAGAAACCCAAAGAGACCTACCCCAATGAGCGTG
TCTGCCCCTTCCCCCAGTGCCGAAAGAGCTGCCCCAGCGCCAGCTCGCTGGAGATCCACATGCGCAGCCA
CAGTGGAGAGCGCCCCTTCGTGTGCCTCATCTGCCTGTCGGCCTTCACCACCAAGGCCAACTGTGAACGC
CATCTCAAGGTGCACACAGACACGCTCAGCGGTGTCTGTCACAACTGTGGCTTCATATCCACCACAAGGG
ACATCCTCTACAGTCACCTGGTGACAAACCACATGGTGTGCCAGCCAGGCTCCAAGGGTGAGATCTACTC
ACCAGGGGCTGGACACCCAGCAGCCAAACTTCCTCCAGACAGCCTGGCAGGCTTTCAACAGCACTCGCTG
ATGCACAGCCCCCTGGTTCCCGCTGACAAGGCACCCACCCCATCCTCAGGACTGGACAGTAAGGCCGAAG
TCACCAACGGAGAGACCAGAGTGCCCCCCCAAAATGGGGGCAGCAGTGAGTCCCCTGCAGCCCCCAGGAC
CATCAAGGTGGAGGCTGCAGAGGAGCCTGAAGCCACCCGTGCCTCCGGTCCGGGAGAGCCAGGTCCCCAG
GCTCCGTCTCGGACACCTTCACCACACAGCCCCAATCCAGTCAGGGTGAAGACAGAACTGTCCAGCCCCA
CGCCTGGCTCTAGCCCAGGGCCGGGAGAGCTAACAATGGCCGGGACACTCTTTCTGCCACAATATGTGTT
CAGTCCGGACGCGGGCACAACCACCGTCCCTACGGCGCCACAGGCCTCGGAGATCCTGGCCAAGATGTCC
GAGTTGGTGCACAACCGGCTACAGCAGGGTGCAGGGAGCTCCGGCGCAGCGGGAACACCCACTGGCCTCT
TCTCGGGGACTAAGGGTGCCACGTGCTTTGAGTGCGAGATCACCTTTAACAATATCAACAACTTCTATGT
GCACAAGCGCCTCTACTGCTCGGGCCGCCGCGCGCCCGAGGACCCGCCCACTGTGCGCAGACCCAAAGCG
GCCACCGGCCCGGCCCGCGCGCCCGCAGGTGCCGCCGCAGAGCCAGACCCGTCACGCTCGTCGCCGGGGC
CCGGGCCACGAGAGGAAGAGGCGAGTGGCACGACTACTCCGGAGGCCGAGGCCGCGGGCCGGGGCAGCGA
GGGCAGCCAGAGCCCGGGCAGCTCCGTAGACGACGCAGAGGACGATCCGAGCCGCACGCTGTGCGAGGCC
TGCAACATCCGGTTTAGCCGCCACGAAACCTACACTGTGCACAAGCGCTACTACTGCGCCTCGCGCCACG
ACCCGCCGCCGCGCCGGCCACCCGCACCCACGACCGCACCGGGACCCGCGGCTCCTGCGCTGACAGCGCC
ACCCGTGCGCACGCGCCGGCGTCGCAAGCTGTACGAGCTGCCCGCAGCTGGCGCCCCGCCCCCAGCCGCA
GGCCCCGCCCCTGTGCCAGTTGTACCCTCCCCCACTGCGGAGCTGCCCTCTTCTCCGAGACCTGGGAGCG
CCAGCGCCGGCCCTGCCCCCGCGCTCTCTCCGAGCCCGGTCCCCGACGGCCCCATAGACCTGAGCAAGCG
GCCGCGTCGCCAGAGCCCGGATGCACCAACAGCTCTGCCCGCGCTGGCCGACTACCACGAGTGTACCGCA
TGTCGCGTAAGCTTCCACAGCCTCGAAGCTTACCTGGCTCACAAGAAGTACTCATGCCCCGCCGCGCCTT
TGCGCACCACTGCCCTCTGCCCCTACTGCCCGCCCAACGGGCGCGTTCGCGGCGACCTGGTTGAGCATTT
GCGCCAGGCACACGGCCTGCAGGTGGCCAAGCCAGCGGCCAGCCCGGGCGCTGAGCCCCGCACACCTGCC
GAGCGTGCTCCGCGCGACAGCCCCGACGGCCGCGCACCACGCTCTCCTTCCCCTGCTCCCGAGAATACGC
CTTCTGACCCAGCAGATCAAGGCGCTCGGACACCCAGCAAGGGCCCGCCAGCTCCTGCTCCTGCGCCGGG
TGGTGGTGGCGGCCACCGCTACTGCCGCCTGTGCAACATCAGGTTCAGCAGCCTGTCCACTTTCATCGCG
CACAAGAAGTATTACTGCTCTTCTCACGCCGCCGAGCACGTAAAGTGA

Translation (995 aa):
MSRRKQSNPRQIKRSLRDMEAGEEAKAMDSSPKEQEAPDPEAPAIEEPPSPPREDVSPPAVPAPPESPED
PEDMEGQELEMRPQDEEKEEKEEEAAMASPWSGPEELELALQDGQRCVRARLSLTEGLSWGPFYGSIQTR
ALSPEREEPGPAVTLMVDESCWLRMLPQVLTEEAANSEIYRKDDALWCRVTKVVPSGGLLYVRLVTEPHG
APRHPVQEPVEPGGLAPVHTDIQLLPQQAGMASILATAVINKDVFPCKDCGIWYRSERNLQAHLLYYCAS
RQRAGSPVSATEEKPKETYPNERVCPFPQCRKSCPSASSLEIHMRSHSGERPFVCLICLSAFTTKANCER
HLKVHTDTLSGVCHNCGFISTTRDILYSHLVTNHMVCQPGSKGEIYSPGAGHPAAKLPPDSLAGFQQHSL
MHSPLVPADKAPTPSSGLDSKAEVTNGETRVPPQNGGSSESPAAPRTIKVEAAEEPEATRASGPGEPGPQ
APSRTPSPHSPNPVRVKTELSSPTPGSSPGPGELTMAGTLFLPQYVFSPDAGTTTVPTAPQASEILAKMS
ELVHNRLQQGAGSSGAAGTPTGLFSGTKGATCFECEITFNNINNFYVHKRLYCSGRRAPEDPPTVRRPKA
ATGPARAPAGAAAEPDPSRSSPGPGPREEEASGTTTPEAEAAGRGSEGSQSPGSSVDDAEDDPSRTLCEA
CNIRFSRHETYTVHKRYYCASRHDPPPRRPPAPTTAPGPAAPALTAPPVRTRRRRKLYELPAAGAPPPAA
GPAPVPVVPSPTAELPSSPRPGSASAGPAPALSPSPVPDGPIDLSKRPRRQSPDAPTALPALADYHECTA
CRVSFHSLEAYLAHKKYSCPAAPLRTTALCPYCPPNGRVRGDLVEHLRQAHGLQVAKPAASPGAEPRTPA
ERAPRDSPDGRAPRSPSPAPENTPSDPADQGARTPSKGPPAPAPAPGGGGGHRYCRLCNIRFSSLSTFIA
HKKYYCSSHAAEHVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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