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Report for CCDS15191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15191.1 Public Mus musculus 1 Farp2 23 108 98 CCDS HistoryNCBI Gene:227377Re-query CCDS DB by CCDS ID:15191.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15191.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120301.7 ENSMUSP00000112725.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120301.7Link to Ensembl Protein Viewer:ENSMUSP00000112725.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120301Re-query CCDS DB by Protein ID:ENSMUSP00000112725
Original member Current member NCBI NM_145519.2 NP_663494.2 Accepted alive Link to Nucleotide Sequence:NM_145519.2Link to Protein Sequence:NP_663494.2Re-query CCDS DB by Nucleotide ID:NM_145519Re-query CCDS DB by Protein ID:NP_663494Link to BLAST:NP_663494.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663494.2 1065 Q91VS8 1065 100% 0 0

Chromosomal Locations for CCDS 15191.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 93528597 93528779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93560236 93560340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93561144 93561186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93563309 93563387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93567417 93567514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93569081 93569195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93569873 93570020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93574371 93574466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93576370 93576533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93576823 93576891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93577648 93577705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93579740 93579998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93599923 93600101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93603378 93603467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93604210 93604343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93605342 93605423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93607433 93607670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93609976 93610106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93612392 93612460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93613118 93613207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93617552 93617634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93618503 93618621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93618893 93619050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93620154 93620261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93620493 93620644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 93621224 93621371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3198 nt):
ATGGGAGAGATAGAAGGAACATACAGAGCTTTACCAACTTCAGGGACACGCTTGGGTGGCCAGACCGCCA
TTGGAGTGAGTACCCTGGAGCCAGAGCAGAGCCTGTCACCCAGGATGCAGGAGAAGCACATGCGCATCAG
AGTGAAGCTGCTGGACAGCACTGTAGAGTTATTTGACATCGAGCCGAAGTGTGACGGGCAGGTCTTACTG
ACTCAAGTGTGGAAGCATTTGAATCTCATTGAATGTGACTACTTTGGTCTGGAGTTCAAGAATGTCCAGT
CCTACTGGATTTGGCTTGAACCTATGAAACCCATCATTAGGCAAGTACGAAAGCCAAAAAATGCGGTGCT
TCGCCTGGCAGTAAAATTTTTCCCGCCTGACCCTGGTCAGCTGCAAGAAGAGTACACAAGGTACCTGTTT
GCCTTGCAACTCAAGAGAGACCTCCTGGAGGAACGCCTGACCTGCACGGCCAACACTGCAGCCCTTCTCA
TATCCCACCTTCTGCAGTCGGAAATCGGAGATTATGATGAAACCCTGGATCGAGAACACCTCAAAGCCAA
TGAATACTTGCCCAACCAGGAGAAATCTCTAGAAAAGATACTAGACTTCCATCAGAGGCACACGGGCCAG
ACTCCTGCAGAGTCAGATTTCCAGGTGCTTGAGATTGCAAGGAAGCTGGAAATGTATGGCATCAGGTTTC
ACATGGCTTCTGACAGAGAAGGGACCAAGATTAATCTAGCAGTTTCTCACATGGGTGTCCTGGTGTTCCA
GGGTACCACCAAAATCAATACCTTCAACTGGTCCAAAGTCCGTAAACTAAGCTTCAAGAGAAAAAGGTTT
CTTATCAAACTCCACCCTGAGGTCCATGGGCCCTACCAGGACACGTTAGAGTTCTTGTTGGGTAGCAGAG
ATGAATGTAAGAACTTCTGGAAGATATGTGTGGAGTACCATACCTTTTTTAGACTCTCTGACCAGCCTAA
GCCAAAGGCAAAGGCTGTCTTCTTCAGCCGAGGCTCCTCCTTCAGATACAGTGGAAGAACTCAGAAACAA
CTAGTAGATTATGTCAAAGACGGTGGAATGAAGAGAATTCCATACGAAAGACGGCACAGTAAGACTCGGA
CATCTCTTCATGCTCTGACTGTAGATCTGCCTAAACAGAGCGTCTCCTTCACCGATGGCTTGAGAACTTC
TGCCTCCCTGTCTTCAGCAAATGTCTCCTTTTATCCACCCCCTAGTTCTTCTTTGTCCCCTCCTGGTCTG
CCCAATTTGAAGGACAGCAGCAGCTCCCTTGTGGATCCGCAGGCTCCCGTCATCAAGAGCACAGCAGCAG
AGAGGAGCAGCGGACCATCATCATCTGACGGCCCCAGCACACAGTCGGCCCATCTCCCTGGACCCCCCGT
GCTCCGGCCTGGTCCAGGCTTTTCTATGGATAGTCCTCAGCCTTCTCCCTCCAGCCTGAAGAGCCACCTG
AGCCTGTGCCCTGAGCTTCAGGCCGCGCTGAGTACAGCTGAGCAGGGTGCATCCCCTGTGCTCAGCCCTG
TGCTCAGTGGCGCTGGTACAGCCAGGATGGACAACCAAGAAGAGCAGAAACACAAGCACATGCCAGAAGA
TGAGGCCTATTTCATAGCCAAGGAGATTCTCGCTACAGAACGAACCTATCTGAAGGATTTAGAAGTTATC
ACTGTGTGGTTCCGGAGCGTGCTGATCAAGGAGGAGGCCATGCCTGCAGCCCTGATGGCCCTGCTTTTCT
CCAACATTGATCCAGTCTACGAGTTCCACAGAGGCTTCCTTCACGAGGTGGAACAGAGGCTGGCACTCTG
GGAAGGGCCCTCCAGTGCCCACTTAAAAGGTGATCACCAGCGAATCGGGGACATCCTCCTCAGGAACATG
CGTCAGTTAAAGGAATTTACTAGCTACTTCCAAAGACACGATGAGGTCCTAACAGAACTGGAAAAGGCCA
CAAAACACTGTAAAAAGCTGGAGGCAGTCTACAAAGAGTTTGAGCTCCAAAAGGTCTGCTACCTGCCTCT
CAACACATTCCTGCTGAAGCCCGTCCAGAGGCTAGTCCACTACCGTCTGCTGCTGAGCCGGCTGTGTGCT
CACTACTCTCCTGGGCACCGCGACTATGCCGACTGCCATGAGGCACTGAAGGCCATCACAGAAGTGACCA
CCGAGCTCCAGCAAAGCCTTACCCGGCTGGAAAACCTACAGAAATTGACGGAGCTACAGCGAGACCTGGT
CGGTGTAGAAAACCTCATTGCTCCTGGGAGGGAGTTTATCCGTGAGGGCTGCCTGCACAAGCTCACCAAG
AAGGGCCTGCAACAGAGGATGTTTTTTCTGTTCTCAGATATGTTGCTGTATACAAGCAAAAGTGTCACAG
GAGCCAGTCATTTCCGGATCCGTGGCTTCCTTCCACTCCGTGGCATGCTGGTAGAAGAAAGTGAGAATGA
ATGGTCTGTTCCTCATTGCTTCACCATCTATGCAGCTCAGAAAACAATTGTGGTAGCAGCCAGCACTCGG
CTAGAAAAGGAAAAGTGGATGCAGGACCTGAATGCAGCAATCCAAGCAGCCAAGACTATCGGTGACTCAC
CCCCAGTGCTGCTGGGAGGCCCGGTGTATACTCGTACCCCTAGATCTTCTGATGAAGTCTCTCTGGAAGA
ATCAGAAGATGGTCGAGGAAACCGGGGCTCCCTGGAGGGGAACAGCCAGCACCGGGCCAATACAACAATG
CATGTGTGCTGGTACCGTAATACAAGTGTGTCCAGAGCAGACCACAGTGCAGCTGTTGAGAACCAGCTTT
CAGGATATCTGCTGAGAAAGTTCAAGAACAGTAATGGCTGGCAGAAGCTCTGGGTGGTCTTTACCAACTT
CTGCTTGTTCTTCTATAAAACACATCAGGATGACTACCCCCTGGCCAGCCTCCCACTATTGGGTTACAGC
GTGAGCCTCCCCAGGGAGGCTGACAGCATCCACAAAGACTATGTCTTCAAGCTCCAATTCAAATCTCACG
TCTACTTCTTCCGGGCTGAGAGCAAGTACACATTTGAAAGGTGGATGGACGTCATCAAAAGGGCCAGCAG
CTCACCAGGGAGACCCCCAAGTTTCACTCAGGACTGCTCACATCACTCTCCAGGGCTGGAGGCAGAGATC
AGAGAAAAGGAGGCATGCCCTTCACCCTGCTTGGACAAGAACCTCTGA

Translation (1065 aa):
MGEIEGTYRALPTSGTRLGGQTAIGVSTLEPEQSLSPRMQEKHMRIRVKLLDSTVELFDIEPKCDGQVLL
TQVWKHLNLIECDYFGLEFKNVQSYWIWLEPMKPIIRQVRKPKNAVLRLAVKFFPPDPGQLQEEYTRYLF
ALQLKRDLLEERLTCTANTAALLISHLLQSEIGDYDETLDREHLKANEYLPNQEKSLEKILDFHQRHTGQ
TPAESDFQVLEIARKLEMYGIRFHMASDREGTKINLAVSHMGVLVFQGTTKINTFNWSKVRKLSFKRKRF
LIKLHPEVHGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLSDQPKPKAKAVFFSRGSSFRYSGRTQKQ
LVDYVKDGGMKRIPYERRHSKTRTSLHALTVDLPKQSVSFTDGLRTSASLSSANVSFYPPPSSSLSPPGL
PNLKDSSSSLVDPQAPVIKSTAAERSSGPSSSDGPSTQSAHLPGPPVLRPGPGFSMDSPQPSPSSLKSHL
SLCPELQAALSTAEQGASPVLSPVLSGAGTARMDNQEEQKHKHMPEDEAYFIAKEILATERTYLKDLEVI
TVWFRSVLIKEEAMPAALMALLFSNIDPVYEFHRGFLHEVEQRLALWEGPSSAHLKGDHQRIGDILLRNM
RQLKEFTSYFQRHDEVLTELEKATKHCKKLEAVYKEFELQKVCYLPLNTFLLKPVQRLVHYRLLLSRLCA
HYSPGHRDYADCHEALKAITEVTTELQQSLTRLENLQKLTELQRDLVGVENLIAPGREFIREGCLHKLTK
KGLQQRMFFLFSDMLLYTSKSVTGASHFRIRGFLPLRGMLVEESENEWSVPHCFTIYAAQKTIVVAASTR
LEKEKWMQDLNAAIQAAKTIGDSPPVLLGGPVYTRTPRSSDEVSLEESEDGRGNRGSLEGNSQHRANTTM
HVCWYRNTSVSRADHSAAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYS
VSLPREADSIHKDYVFKLQFKSHVYFFRAESKYTFERWMDVIKRASSSPGRPPSFTQDCSHHSPGLEAEI
REKEACPSPCLDKNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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