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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS35764.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
35764.1 |
Public |
Mus musculus |
1 |
Fam78b |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Nonsense-mediated decay (NMD) candidate |
Sequence IDs included in CCDS 35764.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000156025.1 |
ENSMUSP00000117572.1 |
Accepted |
alive |
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EBI |
ENSMUST00000126198.2 |
ENSMUSP00000122636.1 |
Accepted |
alive |
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EBI |
ENSMUST00000165874.7 |
ENSMUSP00000131620.1 |
Accepted |
alive |
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EBI |
ENSMUST00000190081.6 |
ENSMUSP00000139628.1 |
Accepted |
alive |
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NCBI |
NM_001160261.1 |
NP_001153733.1 |
Accepted |
alive |
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NCBI |
NM_001160262.1 |
NP_001153734.1 |
Accepted |
alive |
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NCBI |
NM_175461.4 |
NP_780670.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 35764.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (786 nt): ATGGGCTGTATCCAAAGCATCACCTGCAAGGCGCGGATCCGGCGCGAGAACATCGTGGTGTACGATGTGT GCGCCACCATCGACCAGTGCCCCACGCGCATCGAGGAGACCTCGCCCATCGTCCTGCGCTACAAGACCCC TTACTTCAAAGCCTCGGCCCGTGTGGTCATGCCCCCCATCCCCCGCCACGAGACCTGGGTGGTGGGCTGG ATCCAGGCATGCAACCAGATGGAGTTCTTCAACACCTACAGCGACCTGGGCATGTCAAGCTGGGAACTGC CTGACTTGAGGGAAGGGAGAGTAAAAGCCATCAGTGACTCAGACGGGGTGAGCTACCCATGGTACGGGAA CACGACAGAGACTGTGACCCTGGTTGGCCCCACCAACAAGATCTCCAGGTTCTCCGTCAGCATGAATGAT AACTTCTACCCCAGCGTGACATGGGCAGTGCCAGTGAGTGACAGCAATGTGCCACTGCTCACAAGGATCA AGAGGGACCAAAGTTTTACCACATGGCTGGTGGCCATGAACACCACCACCAAGGAAAAGATCATACTGCA GACCATCAAATGGAGGATGAGAGTGGACATTGAAGTGGACCCTCTTCAGCTGTTGGGGCAGCGGGCCCGG CTAGTGGGCAGGACTCAGCAGGAGCAGCCCCGGATCCTGAGCCGGATGGAGCCCATCCCCCCTAACGCAC TAGTGAAGCCCAATGCCAACGATGCCCAGGTCCTCATGTGGAGGCCCAAGCGGGGACCACCTCTGGTTGT GATACCTCCTAAGTAA
Translation (261 aa): MGCIQSITCKARIRRENIVVYDVCATIDQCPTRIEETSPIVLRYKTPYFKASARVVMPPIPRHETWVVGW IQACNQMEFFNTYSDLGMSSWELPDLREGRVKAISDSDGVSYPWYGNTTETVTLVGPTNKISRFSVSMND NFYPSVTWAVPVSDSNVPLLTRIKRDQSFTTWLVAMNTTTKEKIILQTIKWRMRVDIEVDPLQLLGQRAR LVGRTQQEQPRILSRMEPIPPNALVKPNANDAQVLMWRPKRGPPLVVIPPK
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