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Report for CCDS15267.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15267.1 Public Mus musculus 1 Dyrk3 23 108 98 CCDS HistoryNCBI Gene:226419Re-query CCDS DB by CCDS ID:15267.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15267.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016670.8 ENSMUSP00000016670.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016670.8Link to Ensembl Protein Viewer:ENSMUSP00000016670.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000016670Re-query CCDS DB by Protein ID:ENSMUSP00000016670
Original member NCBI NM_145508.2 NP_663483.1 Updated not alive Link to Nucleotide Sequence:NM_145508.2Link to Protein Sequence:NP_663483.1Re-query CCDS DB by Nucleotide ID:NM_145508Re-query CCDS DB by Protein ID:NP_663483
Current member NCBI NM_145508.3 NP_663483.1 Accepted alive Link to Nucleotide Sequence:NM_145508.3Link to Protein Sequence:NP_663483.1Re-query CCDS DB by Nucleotide ID:NM_145508Re-query CCDS DB by Protein ID:NP_663483Link to BLAST:NP_663483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663483.1 586 Q922Y0 586 100% 0 0

Chromosomal Locations for CCDS 15267.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 131128674 131130245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 131136260 131136371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 131138080 131138156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGGGAGGCGCAGCCCGCGATCGCGGGAGGAAGGACGCGGCGCTGCCGGGGGCCGGGCTCCCGCCGCAGC
AG
CGGAGGTTGGGGGATGGTGTCTATGATACTTTCATGATGATAGATGAAACCAAGGGCCCACCCTATTC
G
GACACATTCAGCAACCCCTCTGAAGCACCTGTCTCCAGAAGGCTAAATATTACCACTGAGCCACTCACG
AGA
GGCCACACTCAGCACTTTGTGAATGGAAGTGAGATGAAGGTGGAACAGCTGTTTCAAGAATTTGGCA
AC
AGAAGATCCAATACTCTCCAGTCAGATGGCATCAGCAACTCGGAAAAGTCTTCTCCGGCTTCTCAGGG
G
AAAAGTTCGGAAAGCCTGAGCGCGGTGAAGTGCAACCTTTCCTCCAGGCCGTCTAAGGTGCTGCCGCTG
ACT
CCTGAGCAAGCGCTGAAGCAGTATAAACACCACCTCACTGCCTACGAGAAGCTGGAGATCGTCAGCT
AC
CCAGAAATCTACTTTGTGGGTCCGAATGCCAAAAAGCGGCAGGGAGTTATTGGTGGTCCCAATAACGG
T
GGCTACGACGATGCGGATGGGGCCTATATTCATGTGCCCCGGGACCATCTGGCTTACCGCTATGAGGTG
CTG
AAAATCATCGGCAAGGGGAGTTTTGGACAGGTAGCCCGGGTCTATGATCACAAACTTCGGCAGTACG
TG
GCCCTGAAAATGGTGCGCAATGAGAAACGCTTCCATCGCCAGGCGGCCGAGGAGATCCGGATCTTGGA
G
CATCTTAAAAAGCAAGACAAAACTGGTAGCATGAACGTCATCCACATGCTAGAAAGTTTCACCTTCCGG
AAC
CACGTGTGCATGGCCTTTGAACTGCTAAGCATAGACCTGTATGAGCTTATTAAAAAAAACAAGTTCC
AG
GGCTTCAGCGTCCAGTTGGTTCGGAAGTTCGCCCAGTCCATCCTACAGTCCCTGGACGCTCTGCACAA
A
AACAAGATCATCCACTGCGACCTGAAGCCGGAAAACATTCTCCTGAAACACCACGGCCGAAGCGCCACC
AAG
GTCATCGACTTTGGCTCCAGCTGCTTCGAGTATCAGAAGCTTTACACGTATATCCAGTCCCGCTTCT
AC
AGAGCCCCAGAGATCATCCTGGGGTGCCGCTACAGCACCCCGATCGACATATGGAGCTTTGGTTGCAT
C
CTTGCAGAACTTTTGACAGGACAGCCCCTGTTCCCTGGAGAGGACGAAGGAGACCAGTTGGCCTGCATG
ATA
GAGTTGCTAGGAATGCCACCGCAGAAACTTCTGGAGCAATCCAAGCGTGCCAAGTACTTTATTAACT
CC
AAAGGCTTGCCTCGATACTGCTCCGTATCTACCCAGACGGACGGGAGGGTGGTGCTTCTCGGGGGTCG
C
TCACGCAGGGGTAAAAAGCGAGGCCCGCCAGGCAGCAAAGACTGGGCAACCGCACTGAAGGGCTGTGGT
GAC
TACTTGTTCATAGAGTTTCTGAAACGATGCCTCCAGTGGGACCCCTCTGCCCGCCTCACCCCGGCTC
AA
GCATTAAGACATCCTTGGATTAGCAAGTCTACACCCAAACCTCTCACCATGGACAAGGTGCCAGGGAA
G
CGGGTAGTTAACCCTACAAATGCTTTCCAGGGACTGGGTTCCAAGCTGCCTCCAGTCGTTGGGATAGCC
AGT
AAGCTTAAAGCTAACCTAATGTCCGAAACCAGTGGTAGTATACCTCTGTGCAGTGTATTGCCAAAGC
TG
ATTAGCTAG


Translation (586 aa):
MGGAARDRGRKDAALPGAGLPPQQRRLGDGVYDTFMMIDETKGPPYSDTFSNPSEAPVSRRLNITTEPLT
R
GHTQHFVNGSEMKVEQLFQEFGNRRSNTLQSDGISNSEKSSPASQGKSSESLSAVKCNLSSRPSKVLPL
T
PEQALKQYKHHLTAYEKLEIVSYPEIYFVGPNAKKRQGVIGGPNNGGYDDADGAYIHVPRDHLAYRYEV
L
KIIGKGSFGQVARVYDHKLRQYVALKMVRNEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFR
N
HVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSAT
K
VIDFGSSCFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACM
I
ELLGMPPQKLLEQSKRAKYFINSKGLPRYCSVSTQTDGRVVLLGGRSRRGKKRGPPGSKDWATALKGCG
D
YLFIEFLKRCLQWDPSARLTPAQALRHPWISKSTPKPLTMDKVPGKRVVNPTNAFQGLGSKLPPVVGIA
S
KLKANLMSETSGSIPLCSVLPKLIS




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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