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Report for CCDS37310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37310.1 Public Mus musculus 16 Tmem44 23 108 98 CCDS HistoryNCBI Gene:224090Re-query CCDS DB by CCDS ID:37310.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37310.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000140402.7 ENSMUSP00000123494.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000140402.7Link to Ensembl Protein Viewer:ENSMUSP00000123494.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000140402Re-query CCDS DB by Protein ID:ENSMUSP00000123494
Original member Current member NCBI NM_172614.3 NP_766202.3 Accepted alive Link to Nucleotide Sequence:NM_172614.3Link to Protein Sequence:NP_766202.3Re-query CCDS DB by Nucleotide ID:NM_172614Re-query CCDS DB by Protein ID:NP_766202Link to BLAST:NP_766202.3

Chromosomal Locations for CCDS 37310.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30514715 30514822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30529412 30529570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30537454 30537558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30539389 30539538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30540739 30540909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30543402 30543488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30543677 30543840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30545126 30545219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30547343 30547469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30550363 30550499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGGAGGAGGGGGCTAGCGCCGCGCCCCCGCTCTTGAACTGGGACTACCTGGAGCGCTGCTTCGCCCGCC
GCCGCGTCTGCATCTCCTTCGGCCTGTGGATCTGCGCCGCCTGCTGCTGGATCGCTGCCCACACGCTGAT
TCTCTACCTGAGATGCACAAAGAAGTGTAGCCAAGACCAGTCGACACTGTGCGCTGCGTTCTGCCTCCTA
ACGAGTCTGTGTGACACCGTGGGGGCGATTCTGGCCAGGCAGCTCACGATCCAGGTGTTCACTGGGGCCT
ACCTAGCAGCTGTCGATTTCATGAACTTCATGTTCACTCTCTTTCCTGTCTGTGGATCCAAATCCAAGTC
CAAGTCCGGTCAGAGCAGCAGGGAGAGGAGAAGAAGGCATCTGAGAGCCAGTGTGTTCGCCCTGGCTCTG
CCTCTGAGCCTGGGTCCAGGCTGGGCAATCTGGACCGCTATCCCCAAGGCTCCAGCCCCAGTCCGTGGGC
CACAACGGAGGCTCCTGGGAAGCCTTCTGCAGGAAAACCCGGAAGTCTTCGGCTACCTGCTGGGTGCTAT
TGCTGCCTTTGGCTCCTGGGCATCCCGGATCCCTCCATTCTCCAATATCTGTCGGGGCAAGTCACTCTCC
TATATCCACCTGTGGACCCGGTTCCTGTCAGCTCTGGCTGGTCTCCTCTACGCCTCGGCCATCGTGGCTC
ATGACCGGCAGCCTGAATACCTCCTTCAGGCCACACCCTGGTTCCTGATTTCACTGGGCCGAGCTGCGCT
GGACCTTGCTATCATCTTTCTGTCCTGCGTGATAAAGAGCAGGATGAGCCGAGCCTTCAGATTTGCTACA
GCTGAAGCCAGAGAGAGTGCCGACACACAAGCCCTTTTGACCTGTGCAGAGAAGGAAGAAGAAAACCAGG
AGGCCAGGACGGAGGACAAGAACTCAGACTGGGTGCCTCTGACCAGCCTGTCACACTGCAAGCCCCTGAG
GACAATGACAGCCATCAGTCGCTACATGGAGCTGACCATTGAGCCTGCCCAGCAGGCAGGCTGTAGCGCC
ACCAGGCTGCCCGGTGACGGGCAGACAAGCACCAGAGACGCCGCCTCGCAAGAGCCTCCCTCATACCCTC
CCATCCAGGTCATCCAGGCCAGAGTGTCTTCCAGCAGCTCCTCCGAGGTCTCCTCCATCAACTCGGACCT
GGAGTGGGACCCTGAAGATGTCAACCTTGAAAGGAAAAAGGACGGGGAACTCCTTAGAGTGCAGGTGCGC
AGGGCCTCTTTGAGCCCCGTGGATTTGGCCTCTGATGACTAA

Translation (433 aa):
MEEGASAAPPLLNWDYLERCFARRRVCISFGLWICAACCWIAAHTLILYLRCTKKCSQDQSTLCAAFCLL
TSLCDTVGAILARQLTIQVFTGAYLAAVDFMNFMFTLFPVCGSKSKSKSGQSSRERRRRHLRASVFALAL
PLSLGPGWAIWTAIPKAPAPVRGPQRRLLGSLLQENPEVFGYLLGAIAAFGSWASRIPPFSNICRGKSLS
YIHLWTRFLSALAGLLYASAIVAHDRQPEYLLQATPWFLISLGRAALDLAIIFLSCVIKSRMSRAFRFAT
AEARESADTQALLTCAEKEEENQEARTEDKNSDWVPLTSLSHCKPLRTMTAISRYMELTIEPAQQAGCSA
TRLPGDGQTSTRDAASQEPPSYPPIQVIQARVSSSSSSEVSSINSDLEWDPEDVNLERKKDGELLRVQVR
RASLSPVDLASDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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