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Report for CCDS19245.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19245.1 Public Mus musculus 5 Wfs1 23 108 98 CCDS HistoryNCBI Gene:22393Re-query CCDS DB by CCDS ID:19245.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19245.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043964.12 ENSMUSP00000048053.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043964.12Link to Ensembl Protein Viewer:ENSMUSP00000048053.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000043964Re-query CCDS DB by Protein ID:ENSMUSP00000048053
Original member Current member NCBI NM_011716.2 NP_035846.1 Accepted alive Link to Nucleotide Sequence:NM_011716.2Link to Protein Sequence:NP_035846.1Re-query CCDS DB by Nucleotide ID:NM_011716Re-query CCDS DB by Protein ID:NP_035846Link to BLAST:NP_035846.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035846.1 890 P56695 890 100% 0 0

Chromosomal Locations for CCDS 19245.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 36966873 36968678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36971558 36971709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36973186 36973266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36973734 36973904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36975471 36975615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36976884 36976966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 36982058 36982292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2673 nt):
ATGAACTCAGGCACCCCACCTCCGAGCCCCTCTGGCCCACCTCCTCCACCCGCACCACAGCCCCAGGCCC
GGGCCCGGCTCAATGCCACCGCCTCACTGGAGCAGGACAAGATTGAACCGCCTCGTGCTCCCAGACCTCA
GGCTGACCCCAGTGCTGGACGAAGTGCTGGGGAAGCAGCCGCTCCGGAGCCTCGGGCCCCTCAAACCGGC
AGCCGGGAAGAAACGGACAGAGCTGGTCCCATGAAGGCAGATGTGGAGATCCCCTTTGAAGAAGTCCTGG
AGAAAGCCAAGGCTGGAGACCCCAAAGCACAGACTGAGGTGGGCAAACACTACCTACGCCTTGCCAACGA
TGCAGATGAAGAACTCAACAGCTGCTCAGCCGTAGCCTGGCTAATCCTGGCAGCCAAGCAGGGCAGGCGG
GAGGCCGTGAAGCTGCTGAGGCGGTGCCTAGCTGACCGGAAAGGCATCACTTCTGAGAACGAGGCTGAGG
TGAAGCAGCTATCCTCTGAGACCGACCTGGAAAGGGCTGTGCGCAAGGCTGCCCTGGTCATGTACTGGAA
ACTCAACCCCAAGAAGAAGAAGCAGGTGGCTGTGTCCGAGCTGCTGGAGAATGTTGGACAGGTCAACGAG
CAGGATGGAGGGGCGCAGCCAGGCCCAGTCCCCAAGTCCCTGCAGAAGCAGAGGCGCATGCTGGAGCGCC
TCGTCAGCAGTGAATCCAAGAACTACATTGCTCTGGACGATTTTGTGGAGCTCACCAAGAAGTACGCCAA
GGGCATCATTCCCACCAACCTGTTCCTGCAGGATGAGGATGAAGATGAGGACGAGCTGGCAGGGAAGAGC
CCCGAGGACCTGCCACTACGCCAGAAGGTGGTGAAGTACCCTTTACACGCCATCATGGAGATCAAAGAGT
ACCTGATTGACGTAGCCTCCAAGGCCGGCATGCACTGGCTCTCCACCATTGTACCCACCCATCACATCAA
CGCCCTCATCTTCTTCTTCATCATCAGCAACCTAACCATCGACTTCTTCGCCTTCTTCATCCCCCTGGTG
GTCTTCTATCTGTCCTTTGTGTCCATGGTCATCTGCACGCTCAAGGTGTTCCAGGACAGCAAGGCCTGGG
AGAACTTCCGTACTCTCACCGACCTGCTGCTGCGCTTCGAGCCCAACCTAGACGTGGAGCAGGCCGAAGT
GAACTTCGGCTGGAACCACCTGGAGCCCTACATCCACTTCCTACTGTCAGTCGTCTTTGTCATCTTCTCC
TTCCCGCTGGCCAGCAAGGACTGCATCCCCTGCTCGGAGCTGGCCGTCATCTCCACCTTCTTCACGGTGA
CCAGCTACATGAGCCTGAGCAGCTCTGCTGAGCCCTATACCAGGCGTGCCCTGGTCACCGAGGTGGCTGC
CGGCTTGCTGTCCCTTCTGCCCACCGTGCCTGTGGACTGGCGCTTCCTGAAAGTACTCGGCCAGACTTTC
TTCACTGTGCCCGTTGGCCACTTCATCATCCTCAACGTCAGCCTCCCCTGCCTGCTCTATGTCTATCTCT
TTTACCTCTTCTTCCGCATGGCCCAGCTGAGGAACTTCAAGGGCACTTATTGCTACCTGGTGCCCTACCT
GGTGTGCTTCATGTGGTGTGAACTGTCCGTGGTCATCCTGCTCCAGTCTACCGGCCTGGGCTTGGTCCGG
GCCTCCATCGGCTACTTCCTCTTCCTCTTTGCCCTCCCCATCCTGGTGGCTGGCCTCGCCTTGATGGGCA
CGGTGCAGTTTGCCCGATGGTTCCTGTCGCTGGACCTCACCAAGATCATGGTCACCACGGTGATCTGCGG
CGTACCCCTGCTTTTCCGTTGGTGGACCAAGGCCAACTTCTCAGTGATGGGGATGGTCAAGTCCCTGACG
AAGAGCTCCATGGTGAAGCTCATTCTGGTGTGGCTAACGGCCATCCTGCTCTTCTGCTGGTTCTACGTGT
ACCGCTCAGAAGGCATGAAGGTCTACAACTCCACACTCACCTGGCAGCAATATGGCTTCCTATGTGGGCC
CCGGGCCTGGAAGGAAACTAACATGGCCCGGACCCAGATCCTGTGCAGCCACCTGGAGGGCCACAGGGTC
ACGTGGACAGGCCGCTTCAAGTATGTCCGAGTGACCGAGATCGACAACAGTGCTGAGTCGGCCATCAACA
TGCTCCCGTTCTTCCTGGGCGATTGGATGCGCTGCCTGTATGGCGAGGCCTACCCATCTTGTAGCTCTGG
TAACACGTCCACGGCAGAGGAGGAGCTCTGCCGTCTCAAGCAGCTGGCCAAGCACCCCTGCCACATCAAG
AAGTTTGACCGCTACAAATTTGAGATCACAGTGGGCATGCCCTTTGGCACCAACGGCAACCGCGGCCATG
AAGAGGACGACATCACCAAGGACATTGTTCTCCGTGCCAGCAGCGAGTTCAAGGACGTGCTGCTGAACCT
GCGCCAGGGGAGCCTCATAGAGTTCAGCACCATCCTCGAGGGCCGCCTGGGTAGCAAGTGGCCCGTCTTC
GAGCTCAAGGCCATCAGCTGCCTCAACTGCATGACGCAGCTGTCACCTGCCCGGAGGCACGTGAAGATCG
AACAGGACTGGCGTAGCACAGTGCACGGTGCCCTCAAGTTTGCCTTCGACTTCTTCTTCTTCCCATTCCT
GTCTGCCGCCTGA

Translation (890 aa):
MNSGTPPPSPSGPPPPPAPQPQARARLNATASLEQDKIEPPRAPRPQADPSAGRSAGEAAAPEPRAPQTG
SREETDRAGPMKADVEIPFEEVLEKAKAGDPKAQTEVGKHYLRLANDADEELNSCSAVAWLILAAKQGRR
EAVKLLRRCLADRKGITSENEAEVKQLSSETDLERAVRKAALVMYWKLNPKKKKQVAVSELLENVGQVNE
QDGGAQPGPVPKSLQKQRRMLERLVSSESKNYIALDDFVELTKKYAKGIIPTNLFLQDEDEDEDELAGKS
PEDLPLRQKVVKYPLHAIMEIKEYLIDVASKAGMHWLSTIVPTHHINALIFFFIISNLTIDFFAFFIPLV
VFYLSFVSMVICTLKVFQDSKAWENFRTLTDLLLRFEPNLDVEQAEVNFGWNHLEPYIHFLLSVVFVIFS
FPLASKDCIPCSELAVISTFFTVTSYMSLSSSAEPYTRRALVTEVAAGLLSLLPTVPVDWRFLKVLGQTF
FTVPVGHFIILNVSLPCLLYVYLFYLFFRMAQLRNFKGTYCYLVPYLVCFMWCELSVVILLQSTGLGLVR
ASIGYFLFLFALPILVAGLALMGTVQFARWFLSLDLTKIMVTTVICGVPLLFRWWTKANFSVMGMVKSLT
KSSMVKLILVWLTAILLFCWFYVYRSEGMKVYNSTLTWQQYGFLCGPRAWKETNMARTQILCSHLEGHRV
TWTGRFKYVRVTEIDNSAESAINMLPFFLGDWMRCLYGEAYPSCSSGNTSTAEEELCRLKQLAKHPCHIK
KFDRYKFEITVGMPFGTNGNRGHEEDDITKDIVLRASSEFKDVLLNLRQGSLIEFSTILEGRLGSKWPVF
ELKAISCLNCMTQLSPARRHVKIEQDWRSTVHGALKFAFDFFFFPFLSAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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