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Report for CCDS37164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37164.1 Public Mus musculus 15 Mpped1 23 108 98 CCDS HistoryNCBI Gene:223726Re-query CCDS DB by CCDS ID:37164.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37164.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046168.11 ENSMUSP00000041981.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046168.11Link to Ensembl Protein Viewer:ENSMUSP00000041981.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000046168Re-query CCDS DB by Protein ID:ENSMUSP00000041981
Original member Current member EBI ENSMUST00000109470.7 ENSMUSP00000105096.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109470.7Link to Ensembl Protein Viewer:ENSMUSP00000105096.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109470Re-query CCDS DB by Protein ID:ENSMUSP00000105096
Original member Current member NCBI NM_001359131.1 NP_001346060.1 Accepted alive Link to Nucleotide Sequence:NM_001359131.1Link to Protein Sequence:NP_001346060.1Re-query CCDS DB by Nucleotide ID:NM_001359131Re-query CCDS DB by Protein ID:NP_001346060Link to BLAST:NP_001346060.1
Original member Current member NCBI NM_001359132.1 NP_001346061.1 Accepted alive Link to Nucleotide Sequence:NM_001359132.1Link to Protein Sequence:NP_001346061.1Re-query CCDS DB by Nucleotide ID:NM_001359132Re-query CCDS DB by Protein ID:NP_001346061Link to BLAST:NP_001346061.1
Original member NCBI NM_172610.3 NP_766198.1 Updated not alive Link to Nucleotide Sequence:NM_172610.3Link to Protein Sequence:NP_766198.1Re-query CCDS DB by Nucleotide ID:NM_172610Re-query CCDS DB by Protein ID:NP_766198
Current member NCBI NM_172610.4 NP_766198.1 Accepted alive Link to Nucleotide Sequence:NM_172610.4Link to Protein Sequence:NP_766198.1Re-query CCDS DB by Nucleotide ID:NM_172610Re-query CCDS DB by Protein ID:NP_766198Link to BLAST:NP_766198.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001346060.1 326 Q91ZG2 326 100% 0 0
NP_001346061.1 326 Q91ZG2 326 100% 0 0
NP_766198.1 326 Q91ZG2 326 100% 0 0

Chromosomal Locations for CCDS 37164.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 83792035 83792258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83800003 83800184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83836273 83836498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83852040 83852155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83854412 83854525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83856248 83856366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGTGGCGCCCTAGGTGGGATCCTGGCATCCTGAAGGCTGAAGCCCTGGCCCTGCTCCCCTGTGGCCTGG
GCATGGCGTTCTCTCAGTCTCACGTGATGGCCTCTCGACGGCACCAACATGGCCGACTCATCATCGAGGT
GGACGAATACAGCTCCAATCCCACCCAGGCCTTCACCTTCTACAATATCAACCAGGGCCGCTTCCAGCCA
CCTCACGTGCAGATGGTGGACCCAGTGCCTCACGATGCCCCAAAGCCACCTGGCTACACACGTTTTGTCT
GTGTTTCTGACACTCACTCAAGGACAGATCCCATTCAAATGCCCTACGGCGATGTGCTGATCCACGCTGG
GGACTTCACGGAACTGGGGCTCCCAAGCGAGGTGAAGAAGTTCAATGAATGGCTGGGCAGCCTGCCCTAT
GAGTACAAGATCGTGATTGCGGGCAACCACGAGCTGACCTTCGACCAGGAGTTCATGGCCGACCTCATCA
AGCAGGACTTTTATTATTTCCCGTCCGTGTCCAAGCTGAAGCCGGAGAACTATGAGAACGTGCAGTCTCT
GCTGACCAACTGCATCTACCTGCAGGACTCAGAGGTCACGGTGCGTGGCTTCCGGATCTACGGCTCCCCG
TGGCAGCCCTGGTTCTATGGCTGGGGATTCAACCTCCCGAGAGGCCAAGCGCTCCTGGAGAAGTGGAATC
TCATCCCAGAAGGAGTAGACATCCTTATAACTCATGGACCACCACTGGGCTTTCTAGACTGGGTCCCCAA
GAAGATGCAGCGTGTGGGCTGTGTGGAGCTGCTCAACACAGTCCAGAGGCGGGTCCAGCCACGGCTGCAC
GTCTTTGGCCACATCCATGAAGGGTATGGCGTCATGGCAGACGGGACCACCACCTATGTGAACGCGTCGG
TGTGCACTGTGAACTATCAGCCTGTGAATCCCCCCATAGTCATCGACCTGCCCACACCCCGGAACTCCTG
A

Translation (326 aa):
MWRPRWDPGILKAEALALLPCGLGMAFSQSHVMASRRHQHGRLIIEVDEYSSNPTQAFTFYNINQGRFQP
PHVQMVDPVPHDAPKPPGYTRFVCVSDTHSRTDPIQMPYGDVLIHAGDFTELGLPSEVKKFNEWLGSLPY
EYKIVIAGNHELTFDQEFMADLIKQDFYYFPSVSKLKPENYENVQSLLTNCIYLQDSEVTVRGFRIYGSP
WQPWFYGWGFNLPRGQALLEKWNLIPEGVDILITHGPPLGFLDWVPKKMQRVGCVELLNTVQRRVQPRLH
VFGHIHEGYGVMADGTTTYVNASVCTVNYQPVNPPIVIDLPTPRNS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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