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Report for CCDS5425.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5425.2 Public Homo sapiens 7 MTURN 24 110 108 CCDS HistoryNCBI Gene:222166Re-query CCDS DB by CCDS ID:5425.2See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5425.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324453.13 ENSP00000324204.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324453.13Link to Ensembl Protein Viewer:ENSP00000324204.8Re-query CCDS DB by Nucleotide ID:ENST00000324453Re-query CCDS DB by Protein ID:ENSP00000324204
Original member Current member NCBI NM_152793.3 NP_690006.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152793.3Link to Protein Sequence:NP_690006.2Re-query CCDS DB by Nucleotide ID:NM_152793Re-query CCDS DB by Protein ID:NP_690006Link to BLAST:NP_690006.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690006.2 131 Q8N3F0-1 131 100% 0 0

Chromosomal Locations for CCDS 5425.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30135137 30135298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30146177 30146299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30157438 30157548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGGATTTCCAGCAGCTGGCCGACGTTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCTCATCGCCA
CCGAGGAGACCGAACGCAGGATGGATTTCTACGCCGACCCCGGCGTCTCCTTCTATGTGCTGTGTCCGGA
CAACGGCTGCGGCGACAATTTTCACGTGTGGAGTGAGAGCGAGGACTGCCTGCCTTTCTTGCAGCTAGCA
CAGGATTACATCTCCTCCTGCGGCAAGAAGACGCTCCACGAAGTCCTGGAAAAAGTCTTCAAGTCTTTCA
GACCTTTACTGGGGCTTCCGGATGCAGATGACGATGCGTTTGAAGAGTACAGTGCTGACGTGGAAGAAGA
GGAGCCAGAGGCGGACCACCCCCAGATGGGGGTCAGCCAGCAGTAA

Translation (131 aa):
MDFQQLADVAEKWCSNTPFELIATEETERRMDFYADPGVSFYVLCPDNGCGDNFHVWSESEDCLPFLQLA
QDYISSCGKKTLHEVLEKVFKSFRPLLGLPDADDDAFEEYSADVEEEEPEADHPQMGVSQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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