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Report for CCDS21750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21750.1 Public Mus musculus 7 Ctr9 23 108 98 CCDS HistoryNCBI Gene:22083Re-query CCDS DB by CCDS ID:21750.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21750.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005749.5 ENSMUSP00000005749.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005749.5Link to Ensembl Protein Viewer:ENSMUSP00000005749.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000005749Re-query CCDS DB by Protein ID:ENSMUSP00000005749
Original member Current member NCBI NM_009431.2 NP_033457.2 Accepted alive Link to Nucleotide Sequence:NM_009431.2Link to Protein Sequence:NP_033457.2Re-query CCDS DB by Nucleotide ID:NM_009431Re-query CCDS DB by Protein ID:NP_033457Link to BLAST:NP_033457.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033457.2 1173 Q62018-1 1173 100% 0 0

Chromosomal Locations for CCDS 21750.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 111029137 111029181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111030214 111030312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111033691 111033930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111034348 111034465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111035288 111035377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111038386 111038534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111040555 111040662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111042816 111042923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111043026 111043262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111043417 111043506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111043614 111043742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111043836 111044019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111045377 111045465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111046254 111046439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111046516 111046603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111046763 111046911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111049264 111049380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111049510 111049655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111050434 111050505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111050945 111051080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111051450 111051596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111052302 111052459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111053382 111053478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111053814 111053926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 111055359 111055785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3522 nt):
ATGTCGCGGGGCTCCATCGAGATTCCCCTCCGGGATACTGACGAGGTCATTGAACTTGACTTCGATCAGT
TACCGGAGGGAGACGAAGTCATCAGCATTCTGAAGCAGGAGCACACACAACTGCACATATGGATTGCCTT
GGCGCTGGAATACTACAAGCAAGGGAAAACAGAAGAGTTTGTGAAGCTGCTGGAGGCAGCACGGATAGAT
GGCAATTTGGACTATCGAGATCACGAGAAAGACCAGATGACTTGCTTGGATACATTGGCAGCCTACTATG
TACAACAGGCTCGGAAAGAAAAGAACAAGGACAATAAGAAGGACCTTATTACGCAGGCAACTTTGTTATA
TACAATGGCTGATAAAATTATTATGTATGATCAGAACCATTTGTTGGGAAGAGCCTGCTTCTGTCTGCTC
GAGGGCGACAAAATGGACCAAGCTGACGCACAGTTTCACTTTGTACTTAACCAGTCTCCAAACAATATTC
CAGCCCTTCTTGGGAAAGCTTGTATTTCATTCAACAAGAAGGATTACAGAGGAGCTCTGGCTTACTATAA
AAAAGCATTGCGCACTAACCCGGGATGTCCAGCTGAAGTTCGTTTAGGAATGGGCCATTGCTTTGTCAAA
CTTAACAAACTGGAAAAAGCTCGACTGGCATTCAGCAGAGCCCTGGAACTCAACTCGAAGTGTGTGGGAG
CACTGGTTGGACTGGCTGTTCTAGAACTCAACAATAAAGAGGCTGATTCCATCAAAAATGGCGTGCAGCT
TCTTTCCAGAGCCTATACTATTGATCCTAGCAACCCGATGGTACTGAACCATTTGGCAAACCACTTTTTC
TTCAAGAAGGATTATAGTAAAGTGCAGCACCTGGCTCTCCACGCATTCCACAACACCGAGGTGGAGGCTA
TGCAAGCAGAAAGCTGTTACCAGCTGGCTCGGTCCTTCCATGTTCAGGAAGATTATGACCAAGCCTTTCA
GTACTACTATCAAGCCACACAGTTTGCTTCATCTTCCTTTGTCCTACCATTTTTTGGTTTGGGACAAATG
TATATTTATCGAGGTGACAAAGAGAATGCATCTCAGTGCTTTGAGAAAGTTTTGAAAGCTTATCCGAACA
ATTATGAAACTATGAAAATTCTTGGCTCTCTCTATGCTGCTTCAGAAGATCAGGAGAAACGAGACATAGC
CAAGGGCCATTTGAAGAAGGTCACAGAACAGTATCCTGATGACGTGGAAGCTTGGATTGAGTTGGCCCAG
ATCTTAGAACAGACTGACATACAGGGTGCCCTTTCAGCTTATGGAACAGCCACACGCATCCTGCAGGAGA
AAGTGCAGGCCGATGTCCCTCCCGAGATTTTGAATAATGTTGGGGCCCTCCATTTTAGACTCGGAAACCT
GGGGGAAGCAAAGAAATACTTCCTGGCCTCACTGGACCGCGCAAAGGCAGAGGCCGAGCATGATGAACAC
TACTACAATGCCATCTCTGTCACCACATCCTACAATTTAGCCAGGCTCTATGAGGCCATGTGTGAATTTC
ACGAAGCAGAGAAACTGTACAAAAACATTTTACGAGAGCATCCTAACTACGTTGATTGCTATCTACGCCT
AGGAGCCATGGCCAGAGATAAAGGAAACTTCTATGAAGCTTCAGACTGGTTTAAGGAAGCCCTTCAGATC
AATCAGGATCATCCGGATGCCTGGTCTTTGATTGGTAACCTCCATCTGGCAAAACAAGAATGGGGCCCAG
GTCAGAAGAAGTTTGAGAGGATATTAAAACAGCCAGCCACACAGAGTGACACCTACTCTATGCTGGCCCT
TGGCAATGTGTGGCTCCAGACTTTGCATCAGCCAACCCGAGACCGAGAAAAGGAAAAGCGCCATCAAGAC
CGTGCCCTGGCCATCTACAAACAAGTCCTCAGAAATGATGCCAAGAACCTGTATGCTGCCAATGGCATAG
GAGCTGTCTTGGCCCACAAAGGATACTTCCGTGAAGCTCGTGATGTTTTCGCCCAAGTGAGAGAAGCAAC
AGCAGATATCAGTGATGTGTGGTTGAACCTAGCACACATCTACGTGGAGCAGAAGCAGTATATCAGCGCC
GTTCAGATGTATGAGAACTGCCTCAGAAAGTTCTATAAGCACCAAAACACTGAGGTTGTGCTCTACCTGG
CCCGCGCCCTCTTCAAGTGCGGCAAGCTGCAGGAGTGCAAGCAGACTCTGCTGAAGGCCAGACACGTGGC
ACCCAGTGACACAGTTCTGATGTTTAATGTGGCCTTGGTCTTGCAAAGATTAGCTACCTCTGTCCTGAAA
GATGAAAAAAGTAATCTGAAGGAAGTCCTTAATGCTGTGAAAGAGCTGGAGCTCGCACACAGGTACTTCA
GTTACTTGAGCAAAGTTGGAGATAAAATGAGATTTGATTTGGCCCTTGCTGCCTCTGAAGCCAGGCAGTG
CTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAGCAGGATGAGGAAGAACGGGAG
CTGCGGGCCAAGCAGGAGCAGGAAAAGGAGCTCTTAAGACAGAAGCTTCTCAAAGAGCAGGAAGAGAAAC
GTCTCAGAGAAAAGGAAGAACAAAAGAAACTTTTGGAACAGCGTGCCCAGTATGTGGAGAAGACCAAAAA
TATCCTTATGTTCACTGGCGAGACTGAAGCAACAAAGGAGAAGAAAAGAGGTGGAGGTGGAGGGCGGCGT
TCCAAGAAAGGAGGCGAGTTTGATGAATTTGTCAACGATGACACCGACGATGACCTCCCTGTATCCAAAA
AGAAGAAGAGAAGGAAGGGCAGTGGCAGTGAACAGGAAGGCGAAGAAGAGGAAGGTGGAGAGAGGAAGAA
GAAGAGGAGGAGAAGACCTCCAAAGGGAGAAGAGGGATCTGAGGAGGAGGAGACAGAAAATGGCCCCAAA
CCAAAGAAGCGCCGCCCACCGAGAGCAGAGAAAAAGAAGGCTCCCAAGCCAGAACGCCTGCCTCCTTCAA
TGAAGGGAAAAATAAAATCCAAAGCCATTATATCATCAAGTGATGATTCTTCAGATGAGGATAAACTGAA
AATTGCTGATGAAGGACATCCCAGGAATAGCAACAGCGATTCTGATGACGACGAGAGGCCCAACAGACGC
GCCTCATCTGAGAGCGACTCAGATGACAACCAGAACAAGTCTGGCAGCGAGGCAGGCAGCCCTCGGAGGT
CGGGTAGACAGGAGTCGGATGAGGATTCCGACAGTGACCAGCCGTCCAGAAAGAGAAGGCGCTCCGGCTC
TGAGCAGTCGGACAATGAGTCTGTGCAGTCAGGGAGAAGCCCCTCCGGAGCTTCTGAGAACGAGAACGAT
TCTCGCCCGGCTTCTCCAAGTGCAGAATCGGACCACGAATCAGAGCAGGGCTCTGACAACGAGGGCTCTG
GCCAAGGCTCTGGAAATGAATCAGAACCAGAGGGCTCAAACAACGAGGCCTCAGACCGAGGCTCAGAACA
TGGGTCAGATGATAGCGACTAG

Translation (1173 aa):
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLEAARID
GNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMADKIIMYDQNHLLGRACFCLL
EGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAYYKKALRTNPGCPAEVRLGMGHCFVK
LNKLEKARLAFSRALELNSKCVGALVGLAVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFF
FKKDYSKVQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQM
YIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEH
YYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQI
NQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSDTYSMLALGNVWLQTLHQPTRDREKEKRHQD
RALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISA
VQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLK
DEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKEKKRGGGGGRR
SKKGGEFDEFVNDDTDDDLPVSKKKKRRKGSGSEQEGEEEEGGERKKKRRRRPPKGEEGSEEEETENGPK
PKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRNSNSDSDDDERPNRR
ASSESDSDDNQNKSGSEAGSPRRSGRQESDEDSDSDQPSRKRRRSGSEQSDNESVQSGRSPSGASENEND
SRPASPSAESDHESEQGSDNEGSGQGSGNESEPEGSNNEASDRGSEHGSDDSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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