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Report for CCDS26062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26062.1 Public Mus musculus 12 Flvcr2 23 108 98 CCDS HistoryNCBI Gene:217721Re-query CCDS DB by CCDS ID:26062.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26062.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040461.3 ENSMUSP00000035569.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040461.3Link to Ensembl Protein Viewer:ENSMUSP00000035569.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000040461Re-query CCDS DB by Protein ID:ENSMUSP00000035569
Original member Current member NCBI NM_145447.2 NP_663422.1 Accepted alive Link to Nucleotide Sequence:NM_145447.2Link to Protein Sequence:NP_663422.1Re-query CCDS DB by Nucleotide ID:NM_145447Re-query CCDS DB by Protein ID:NP_663422Link to BLAST:NP_663422.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663422.1 551 Q91X85 551 99.637% 0 2

Chromosomal Locations for CCDS 26062.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 85746852 85747589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85782957 85783098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85786088 85786228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85796175 85796242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85798498 85798601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85803135 85803245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85804368 85804473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85804596 85804707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85805196 85805251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85812042 85812119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1656 nt):
ATGGTGAATGAAAGTCTCAACCAGGAGGAGAGCAATGACAGACCTGCGCCAGAGTCGGAATTCCAGATGG
ACACCAGCTACTCCACCCAGCCCAGCGGCTCCATCCATCCCAGCGTCTCAGGCCACCCCAGCGTCTCAGG
CCACCCCAGCGTCTCAGGCCACCCCAGTGTCTCCATCCATCCTAGTGTCTCCATCGACCCCAGCGTCTCT
GTCCGTCCCAGCAGTTCAGCACTCCCCAGTACCTTGGCTCAACCCAGCGGTTTGACCCATCATAGTAGCT
TGGTTAGAGAAGACAGCGTGATCAAGGTGAGCAAGCGTCGTTGGGTCGTGGTCCTGGTGTTCAGTTGCTA
CTCCTTGTGCAATGCCTTCCAGTGGATTCAGTACGGCTCCATCAATAACATCTTCATGAACTTCTACGGT
GTCAGTGCCTTTGCCATTGATTGGCTGTCCATGTGCTACATGCTGACCTACATCCCTCTGCTCCTGCCCG
TGGCCTGGATGCTGGAGAAATTTGGTCTTCGAACCATCGCTATCACCGGCTCAGCTCTCAATTGCCTGGG
AGCCTGGGTAAAGCTGGGCAGCCTAGAGCCTCACCTCTTCCCGGTCACAATGGTGGGTCAGGTCATCTGC
TCTGTGGCACAGGTCTTCATTCTGGGCATGCCCTCACGCATTGCTTCGGTCTGGTTTGGAGCTGATGAGG
TTTCAACAGCCTGCTCCGTGGCTGTGTTTGGCAATCAGCTTGGAATTGCAATTGGGTTTTTGGTCCCTCC
TGTTCTGGTACCCAACATCAAAGACCCGGAAAAGCTTGCCTACCACATCAGCATCATGTTCTACATAATA
GGAGGCGTGGCCACTTTCCTCTTCATCCTTGTCATCATCGTATTCAAGGAGAAGCCCAAGCACCCTCCCA
GCAGGGCCCAGTCCTTGAGCTATGCCTTAGCGACCACTGATGCTTCCTACTTAAGTTCCATTGTCCGACT
CTTCAAAAACCTCAACTTCGTGCTGCTGGTCATCACCTATGGTCTGAATGCTGGTGCTTTCTACGCCTTA
TCCACTCTGCTGAATCGCATGGTGATCTTGCACTTCCCGGGGGAAGAAGTGAATGCTGGAAGAATCGGTC
TGACCATCGTCATTGCAGGAATGTTTGGTGCTATGATCTCAGGCATCTGGCTGGATAAATCCAAAACCTA
CAAGGAGACAACCCTGGTAGTGTATATCATGACTCTGGTGGGCATGGTGGTATACACATTCACCTTGAAC
CTGAACCATTTGTGGGTAGTATTCATCACTGCTGGCACACTGGGCTTCTTCATGACTGGCTATCTGCCCC
TGGGGTTTGAGTTTGCTGTGGAGCTCACATACCCAGAATCTGAAGGCGTGTCATCTGGCCTCCTCAACGT
GTCGGCACAGGTATTTGGGATCGTTTTCACCATCTCTCAAGGCCAGATTATTGACAACCATGGAACCATG
TTTGGGAACATCTTCCTGTGTGTGTTCCTTGCCCTTGGATCAGCTCTAACAGCTTTCATTAAGTCAGATC
TTCGGAGACAGAGGGCAAACAAGGATGCTCCTGAGACCAAAGTCCAGGAGGAGGAAGAGGAGGAGGAGGG
GAGCAATACCAGCAAGGTACCCGTCGTGTCGGAGGCTCATCTCTGA

Translation (551 aa):
MVNESLNQEESNDRPAPESEFQMDTSYSTQPSGSIHPSVSGHPSVSGHPSVSGHPSVSIHPSVSIDPSVS
VRPSSSALPSTLAQPSGLTHHSSLVREDSVIKVSKRRWVVVLVFSCYSLCNAFQWIQYGSINNIFMNFYG
VSAFAIDWLSMCYMLTYIPLLLPVAWMLEKFGLRTIAITGSALNCLGAWVKLGSLEPHLFPVTMVGQVIC
SVAQVFILGMPSRIASVWFGADEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIKDPEKLAYHISIMFYII
GGVATFLFILVIIVFKEKPKHPPSRAQSLSYALATTDASYLSSIVRLFKNLNFVLLVITYGLNAGAFYAL
STLLNRMVILHFPGEEVNAGRIGLTIVIAGMFGAMISGIWLDKSKTYKETTLVVYIMTLVGMVVYTFTLN
LNHLWVVFITAGTLGFFMTGYLPLGFEFAVELTYPESEGVSSGLLNVSAQVFGIVFTISQGQIIDNHGTM
FGNIFLCVFLALGSALTAFIKSDLRRQRANKDAPETKVQEEEEEEEGSNTSKVPVVSEAHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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