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Report for CCDS36042.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36042.1 Public Mus musculus 10 Eea1 23 108 98 CCDS HistoryNCBI Gene:216238Re-query CCDS DB by CCDS ID:36042.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36042.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053484.7 ENSMUSP00000061493.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053484.7Link to Ensembl Protein Viewer:ENSMUSP00000061493.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000053484Re-query CCDS DB by Protein ID:ENSMUSP00000061493
Original member Current member NCBI NM_001001932.3 NP_001001932.1 Accepted alive Link to Nucleotide Sequence:NM_001001932.3Link to Protein Sequence:NP_001001932.1Re-query CCDS DB by Nucleotide ID:NM_001001932Re-query CCDS DB by Protein ID:NP_001001932Link to BLAST:NP_001001932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001932.1 1411 Q8BL66 1411 100% 0 0

Chromosomal Locations for CCDS 36042.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 95940949 95940972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95973986 95974078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95989562 95989689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95990255 95990309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95990400 95990465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95993424 95993463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95994885 95994998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95995569 95995690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 95996937 95997092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96002887 96003003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96010775 96011113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96012085 96012234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96013306 96013425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96018006 96018209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96019831 96020031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96021607 96021720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96023897 96024052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96026032 96026171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96026557 96026887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96027052 96027153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96028393 96028587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96031511 96031693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96036580 96036765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96037414 96037545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96038693 96038878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96039523 96039761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96040252 96040372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96041440 96041538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 96042082 96042204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4236 nt):
ATGTTTCGAAGGATCTTGCAGAGGACTCCTGGGCGAGTTGGCTCTCAAGGTTCTGATTTAGATTCATCAG
CAACTCCTATAAATACGGTGGATGTCAATAATGAAAGTTCTTCAGAGGGTTTCATATGTCCCCAGTGTAT
GAAATCCCTTGGCTCTGCTGATGAGCTTTTCAAGCACTATCAGGCCGTTCATGATGCTGGTAATGACTCG
GGTCATGGTGGAGAGGCCGGTCTTGCTTTGACACGAGATGACATAACACTACTCAGACAAGAGGTCCAAG
ACCTACAGGCCTCACTTAAGGAAGAAAAATGGTACTCAGAAGAATTAAAGAAAGAATTAGAAAAATATCA
AGGGCTACAGCAGCAAGAGGCTAAATCTGATGGATTGGTGACTGATTCGTCAGCAGAGCTACAGGCTTTA
GAGCAACAATTAGAAGAAGCACAAACAGAGAATTTTAATATTAAGCAAATGAAAGATCTGTTTGAACAGA
AAGCAGCCCAACTTGCTACTGAAATTGCAGATATAAAGTCAAAATATGATGAAGAAAAGAGTCTCCGAGC
AGCTGCTGAACAAAAAGTGACACATTTGACAGAAGACTTAAACAAACAGACAACTGTAATTCAAGATCTG
AAAACTGAACTGCTTCAGAGACCTGGTATAGAAGATGTTGCTGTACTAAAGAAAGAACTGGTCCAAGTTC
AAACACTAATGGATAACATGACTTTGGAACGTGAGAGAGAATCTGAAAAACTTAAAGATGAATGCAAAAA
GTTACAATCAGAGCATGCTCATTTGGAGGCTACAATAAACCAGCTAAGGAGTGAACTTGCCAAAGGCCCC
CAAGAAGTTGCAGTATATGTGCAGGAAATACAAAAACTTAAAGGTTCAATTAATGAATTAACACAAAAAA
ACCAGAACTTGACTGAAAAATTGCAGAAGAAAGACCTAGACTACACCCACTTAGAGGAGAAGCACAATGA
AGAGTCAGCAAGTCGGAAGACTCTCCAGGCATCCCTCCACCAGCGGGACCTGGATTGCCAGCAGCTTCAG
GCAAGGCTAACTGCATCTGAAAGCTCACTCCAGAGGGCCCAGGGAGAACTCAGTGAAAAGGCAGAGGCTG
CTCAGAAGCTCAGAGAAGAACTGCGGGAAGTAGAGAGCACGCGCCAGCATCTCAAGGTGGAGGTGAAGCA
GCTGCAGCAGCAGCGGGAAGAGAAGGAACAGCACGGGCTGCAGCTGCAGGGGGAAGTCAGCCAGTTACAC
TGCAAACTTCTGGAGACCGAGCGCCAACTGGGGGAAGCTCACGGCAGGCTGAAGGAACAGCGGCAGCTTT
CCAGCGAGAAGCTGATGGAAAAGGAGCAGCAGGTGGCTGACCTACAGCTCAAGCTCTCTCGTCTGGAGGA
GCAGTTGAAGGAAAAGGTAACAAATTCCACTGAATTACAACATCAGTTAGAAAAATCAAAGCAACAGCAT
CAAGAACAGCAAGCTCTACAGCAAAGTGCTACAGCCAAACTCCGAGAAGCTCAGAATGATTTGGAGCAAG
TGTTACGTCAGATTGGAGATAAGGACCAAAAGATCCAGAACCTTGAAGCCTTGCTGCAGAAGGGTAAAGA
AAGCGTTTCCTTACTAGAAAAGGAAAGAGAAGATCTTTATGCAAAAATCCAGGCCGGTGAAGGAGAGACT
GCTGTTCTTAACCAGTTACAAGAGAAAAATCATGCACTGCAGCAGCAGCTAACTCAACTGACGGAGAAGC
TGAAGAATCAGTCGGAAAGCCATAAACAAGCCGAGGAGAACTTGCATGACCAGGTACAGGAACAGAAGGC
ACATCTTCGAGCTGCACAAGACCGTGTTCTTTCTCTGGAAACCAGTGTCAGTGAACTAAGCAGTCAGTTA
AATGAAAGCAAGGAGAAGGTCTCGCAGCTTGACATACAGATTAAAGCCAAAACTGAATTATTACTATCAG
CAGAAGCAGCAAAAGCTGCTCAGAGAGCTGATCTTCAGAATCACTTGGACACAGCTCAACATGCGTTACA
GGATAAACAACAGGAGTTAAATAAGGTCAGTGTGCAGTTGGATCAGCTCACTGCAAAGTTTCAGGAGAAG
CAGGAGCATTGCATTCAGCTGGAAAGCCACCTTAAGGATCACAAGGAGAAGCACCTCTCTTTAGAACAAA
AAGTTGAAGACTTAGAAGGCCACATTAAGAAACTAGAAGCTGATGCTCTTGAAGTTAAAGCCAGCAAGGA
ACAGGCTTTGCAGAGTCTACAGCAGCAGAGGCAGCTGAGCACAGACCTGGAGTTGAGAAATGCAGAGCTG
AGTAGAGAGCTCCAGGAGCAGGAGGAAGTAGTATCTTGTACAAAACTGGATCTACAGAATAAATCTGAAA
TCCTTGAAAATATCAAACAAACCCTCACCAAGAAAGAAGAAGAAAATGTCGTCTTGAAACAAGAATTTGA
AAAGTTAAGTCAAGATTCAAAGACACAGCACAAGGAGCTGGGGGACAGGATGCAAGCTGCGGTCACAGAG
CTGACAGCAGTGAAGGCACAGAAGGACGCACTCCTGGCCGAGCTTTCTACAACAAAAGAAAAACTGTCAA
AAGTTTCGGATTCTTTAAAAAACTCCAAAAGTGAATTTGAGAAAGAAAATCAGAAAGGAAAAGCTGCTGT
ATTAGATTTGGAAAAAGCTTGTAAAGAATTAAAGCATCAGCTTCAAGTACAGGCAGAGAGTGCCCTGAAG
GAGCAGGAGGACCTGAAAAAGTCACTCGAGAAAGAGAAAGAGACTTCTCAGCAGTTGAAGATAGAACTCA
ATTCAGTCAAGGGAGAAGTCTCACAGGCTCAAAATACATTAAAGCAAAAGGAGAAAGACGAACAACAGCT
TCAGGGGACCATAAATCAGCTAAAGCAATCAGCTGAACAAAAGAAAAAACAAATTGAAGCGCTTCAAGGA
GAGGTTAAAAATGCTGTTTCACAAAAGACAGTGCTGGAGAATAAGCTGCAGCAGCAGTCATCACAGGCAG
CCCAGGAGCTTGCAGCAGAGAAAGGAAAACTGTCAGCGCTGCAGAGCAACTACGAGAAGTGCCAGGCGGA
CCTGAAACAGCTGCAGTCCGACCTCTATGGCAAAGAGTCTGAACTTCTAGCCACGAGGCAAGACCTTAAG
TCTGTAGAAGAGAAGCTCACTCTGGCACAAGAAGACTTGATTTCAAACAGAAATCAAATTGGAAACCAAA
ATAAATCAATTCAAGAATTGCAAGCCGCCAAAGCTAGTTTGGAGCAGGACTCAGCAAAGAAAGAGGCGCT
GCTAAAGGAGCAGAGTAAGGCACTTGAGGATGCTCAGAGAGAAAAGTCAGTGAAGGAAAAAGAACTAGTA
GCTGAAAAGTCTAAATTGGCAGAGATGGAGGAAATTAAATGTAGACAAGAAAAAGAAATCACAAAACTCA
ATGAGGAGCTCAAGTCGCACAAACAAGAAAGCATAAAGGAAATAACAAATCTCAAGGATGCCAAGCAACT
TTTGATTCAACAGAAATTAGAACTTCAAGGCAGAGTGGACTCACTGAAGGCAGCTCTTGAGCAGGAGAAG
GAGAGTCAGCAGCTGATGCGAGAGCAGGTGAAGAAGGAGGAAGAGAAGCGGAAGGAAGAGTTTTCTGAGA
AGGAAGCGAAGCTGCATTCTGAAATAAAAGAAAAGGAAGCGGGAATGAAGAAACACGAAGAAAACGAGGC
TAAGCTTACTATGCAGGTCACAACATTAAATGAAAACTTGGGTACTGTGAAGAAGGAGTGGCAGTCTAGT
CAACGGAGAGTCAGTGAGCTTGAGAAGCAAACGGATGACTTACGGGGAGAAATTGCTGTCTTAGAAGCAA
CTGTTCAGAATAATCAAGACGAAAGAAGAGCACTCCTAGAGAGGTGTCTTAAAGGCGAAGGTGAAATAGA
AAAGCTTCAGACCAAAGCCCTAGAGCTGCAGAGAAAGCTGGATAACACAACTGCGGCCGTGCAGGAGCTG
GGCAGGGAGAACCAGTCTCTCCAGATCAAACACACACAAGCATTGAACAGAAAGTGGGCGGAAGACAACG
AAGTGCAGAACTGCATGTCCTGTGGGAAGTGCTTCTCCGTCACCGTGCGGCGGCATCACTGCCGACAGTG
TGGGAATATCTTCTGTGCCGAGTGCTCAACCAAAAATGCCTTAACTCCTTCTTCGAAGAAGCCTGTTCGT
GTCTGTGATGCATGCTTCAATGATTTGCAAGGATAA

Translation (1411 aa):
MFRRILQRTPGRVGSQGSDLDSSATPINTVDVNNESSSEGFICPQCMKSLGSADELFKHYQAVHDAGNDS
GHGGEAGLALTRDDITLLRQEVQDLQASLKEEKWYSEELKKELEKYQGLQQQEAKSDGLVTDSSAELQAL
EQQLEEAQTENFNIKQMKDLFEQKAAQLATEIADIKSKYDEEKSLRAAAEQKVTHLTEDLNKQTTVIQDL
KTELLQRPGIEDVAVLKKELVQVQTLMDNMTLERERESEKLKDECKKLQSEHAHLEATINQLRSELAKGP
QEVAVYVQEIQKLKGSINELTQKNQNLTEKLQKKDLDYTHLEEKHNEESASRKTLQASLHQRDLDCQQLQ
ARLTASESSLQRAQGELSEKAEAAQKLREELREVESTRQHLKVEVKQLQQQREEKEQHGLQLQGEVSQLH
CKLLETERQLGEAHGRLKEQRQLSSEKLMEKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLEKSKQQH
QEQQALQQSATAKLREAQNDLEQVLRQIGDKDQKIQNLEALLQKGKESVSLLEKEREDLYAKIQAGEGET
AVLNQLQEKNHALQQQLTQLTEKLKNQSESHKQAEENLHDQVQEQKAHLRAAQDRVLSLETSVSELSSQL
NESKEKVSQLDIQIKAKTELLLSAEAAKAAQRADLQNHLDTAQHALQDKQQELNKVSVQLDQLTAKFQEK
QEHCIQLESHLKDHKEKHLSLEQKVEDLEGHIKKLEADALEVKASKEQALQSLQQQRQLSTDLELRNAEL
SRELQEQEEVVSCTKLDLQNKSEILENIKQTLTKKEEENVVLKQEFEKLSQDSKTQHKELGDRMQAAVTE
LTAVKAQKDALLAELSTTKEKLSKVSDSLKNSKSEFEKENQKGKAAVLDLEKACKELKHQLQVQAESALK
EQEDLKKSLEKEKETSQQLKIELNSVKGEVSQAQNTLKQKEKDEQQLQGTINQLKQSAEQKKKQIEALQG
EVKNAVSQKTVLENKLQQQSSQAAQELAAEKGKLSALQSNYEKCQADLKQLQSDLYGKESELLATRQDLK
SVEEKLTLAQEDLISNRNQIGNQNKSIQELQAAKASLEQDSAKKEALLKEQSKALEDAQREKSVKEKELV
AEKSKLAEMEEIKCRQEKEITKLNEELKSHKQESIKEITNLKDAKQLLIQQKLELQGRVDSLKAALEQEK
ESQQLMREQVKKEEEKRKEEFSEKEAKLHSEIKEKEAGMKKHEENEAKLTMQVTTLNENLGTVKKEWQSS
QRRVSELEKQTDDLRGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKALELQRKLDNTTAAVQEL
GRENQSLQIKHTQALNRKWAEDNEVQNCMSCGKCFSVTVRRHHCRQCGNIFCAECSTKNALTPSSKKPVR
VCDACFNDLQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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