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Report for CCDS15631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15631.1 Public Mus musculus 1 Utp25 23 108 98 CCDS HistoryNCBI Gene:215193Re-query CCDS DB by CCDS ID:15631.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085555.6 ENSMUSP00000082691.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085555.6Link to Ensembl Protein Viewer:ENSMUSP00000082691.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000085555Re-query CCDS DB by Protein ID:ENSMUSP00000082691
Original member NCBI NM_145415.2 NP_663390.2 Updated not alive Link to Nucleotide Sequence:NM_145415.2Link to Protein Sequence:NP_663390.2Re-query CCDS DB by Nucleotide ID:NM_145415Re-query CCDS DB by Protein ID:NP_663390
Current member NCBI NM_145415.3 NP_663390.2 Accepted alive Link to Nucleotide Sequence:NM_145415.3Link to Protein Sequence:NP_663390.2Re-query CCDS DB by Nucleotide ID:NM_145415Re-query CCDS DB by Protein ID:NP_663390Link to BLAST:NP_663390.2

Chromosomal Locations for CCDS 15631.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 193107543 193107786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193113757 193114002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193114605 193114717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193114839 193115021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193117501 193117703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193118193 193118412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193120310 193120720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193122006 193122094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193123638 193123808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193128267 193128546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193129491 193129530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 193130044 193130150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2307 nt):
ATGGGCAAACGCCGGAACCGGGGCCGCAGCCAGATGCTCAGCACCATGACCAAGAAGCAGAAGAAGCACC
TCCGCGACTTCGGCGAGGAGCACCCCTTCTACGACAGGGTTTCCAAGAAGGAAGCCAAGCCGCAGATTTG
TCAGCTGCCAGAGAGTTCAGATTCTTCACATTCTGAAAGTGAATCAGAGAGTGAACAAGAGCACGTTTCA
GGGTACCACAGACTGCTTGCTACATTAAAGAATGTTTCTGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGATGACAGTGCTGTAGGTGATGCAGAAATGAATGAGGA
AGCTGGCAGTGAGGATGGCAGTGTGGGAGAAGCTGCTGTCTCGGAGGCTGCTGAGGAGGCTGCTGAGACA
CAGGAACATATGTCTCTAGCTGACAACTCAAAAGAAAAAGATGGTGAAGAGCCACCTGGTGTATCACAGA
AATCCTCAGAGGAGTTCACAGATGTGAAACACGAGTCACTGTTCAGCCTGGAAACTAATTTTCTAGAAGA
GGATAGCGGGGGCAGTTGTTCCCAGAGGCCATCCCAAGATCCGTTTCAACAACATGTCAACAAAGAACTG
AAAGAGAAGGAAATTCAAGCTGCTGCTTCCAGCCCTCCAGCTACCCAGCAACTGAAATGGCCAGTCCTGG
GACATCTTGTCTTTTCATCAAAGTTCCAGAAGACGGAAACATTTAAACCTCCAAAGGATATTGACCTAAA
GTTACTTCATCTTCAGAAGCCTCTAGAATCCACCTGGGCAAAAACCAATAGCCAATTTCTATCTGGACCT
CAAAAATCAAATAGCTCCTTTACCCCGCTCCAGAAAGAGCTGTTCTTAATTATGAATTCTTACCGGGACC
TGTTCTACCCTGAGAGGACTGCCCTGAAGAATGGAGAAGAAGTCCGCCATGTATACTGCCTGCATGCCAT
AAACCATGTCCTCAAAGCCAATGCTCAGGTGCTGGCTAACAACAGTAGGCGCCGGAGCCAGAAACTTGGG
GTGGGTGAAGATGATGACTTCAGGGACCAAGGGCTCACCAGGCCTAAGGTACTTATAGTGGTGCCCTTCC
GGGAAGCTGCCCTTCGGGTGGTCCAGCTCTTCATCAGCCTCCTTGAAGGGGACAGCAAGAAGAAAATCAT
TGTAAGCAATAAAAAGCGGTTTCAGGGGGAGTATGGATCTGATCCTGAGGAGAGACCTCCCAACCTGAAG
AGGCCTGAGGATTATGAAGCTGTGTTCGTGGGCAATATTGATGACCACTTCAGGATTGGAGTGGCAATAC
TTCAGAGGAGCATCCGTCTCTACGCCCCGTTTTACTCCTCCGACATCCTCATTGCCTCCCCCCTGGGCTT
GAGGACCATCATTGGTGGTGAAGGAGAGAAGAAGAGAGATTTTGACTTCCTGTCTTCCGTTGAGCTGCTC
ATCATTGACCAGGCTGACATTTACCTGATGCAGAACTGGGAACATGTCTTGCATTTGATGAACCACATGA
ACCTGCTGCCCTTGGACTCACACGGGGTGGACTTCTCGAGAGTCCGAATGTGGAGCCTCAATAACTGGTC
CAAGTACTACCGACAGACACTGCTCTTTGGTGCCCTGCAGGATGCCCAGATCAACTCTGTGTTCAACAAG
CACTGCATCAATGCTCAAGGCCAGGTGGCTGTGAGGAATGTCCCCATGACGGGCTCCATCAGTCATGTGT
TGGTGCAGCTCCCTCACGTCTTCCAGAGAATGGAAGCACAAGACCTATCTTCAGTGATCGATGCCAGGTT
TCACTTTTTCATAAACAAGATTTTGCCTCAGTACCGGGATGCTGTCATGTCTCACACACTCATCTATGTC
CCCTCCTACTTTGACTTTGTGCGTCTCCGAAATTACTTCAAGAAAGAAGAGCTGAACTTCACACACATCT
GCGAGTATACGCAGAAGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGAGAAGCAGTTTCT
GCTCCTCACAGAACGCTTCCATTTCTACAAAAGGTACACAATAAAAGGCATCAGGAACCTGATATTCTAT
GAACTGCCAACGTACCCTCACTTCTACAGTGAGGTCTGTAACATGCTGAGAGCCACCAGCAGAGGAGAGG
AGGCCACGTGGACGTGCACCGTGCTGTATTCCAAGTATGATGCCCAGAGGCTGGCGGCTGTGGTTGGTGT
GGAGCGGGCGGCACAGATGCTGCAGTCTCCAAAGAATGTCCACCTCTTCGTCACCGGAGAAAAATGA

Translation (768 aa):
MGKRRNRGRSQMLSTMTKKQKKHLRDFGEEHPFYDRVSKKEAKPQICQLPESSDSSHSESESESEQEHVS
GYHRLLATLKNVSEEEEEEEEEEEEEEEEEEEEEDDSAVGDAEMNEEAGSEDGSVGEAAVSEAAEEAAET
QEHMSLADNSKEKDGEEPPGVSQKSSEEFTDVKHESLFSLETNFLEEDSGGSCSQRPSQDPFQQHVNKEL
KEKEIQAAASSPPATQQLKWPVLGHLVFSSKFQKTETFKPPKDIDLKLLHLQKPLESTWAKTNSQFLSGP
QKSNSSFTPLQKELFLIMNSYRDLFYPERTALKNGEEVRHVYCLHAINHVLKANAQVLANNSRRRSQKLG
VGEDDDFRDQGLTRPKVLIVVPFREAALRVVQLFISLLEGDSKKKIIVSNKKRFQGEYGSDPEERPPNLK
RPEDYEAVFVGNIDDHFRIGVAILQRSIRLYAPFYSSDILIASPLGLRTIIGGEGEKKRDFDFLSSVELL
IIDQADIYLMQNWEHVLHLMNHMNLLPLDSHGVDFSRVRMWSLNNWSKYYRQTLLFGALQDAQINSVFNK
HCINAQGQVAVRNVPMTGSISHVLVQLPHVFQRMEAQDLSSVIDARFHFFINKILPQYRDAVMSHTLIYV
PSYFDFVRLRNYFKKEELNFTHICEYTQKSGISRARHFFLQGEKQFLLLTERFHFYKRYTIKGIRNLIFY
ELPTYPHFYSEVCNMLRATSRGEEATWTCTVLYSKYDAQRLAAVVGVERAAQMLQSPKNVHLFVTGEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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