NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS27298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27298.1 Public Mus musculus 14 Kbtbd7 23 108 98 CCDS HistoryNCBI Gene:211255Re-query CCDS DB by CCDS ID:27298.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27298.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061222.8 ENSMUSP00000060768.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061222.8Link to Ensembl Protein Viewer:ENSMUSP00000060768.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000061222Re-query CCDS DB by Protein ID:ENSMUSP00000060768
Original member Current member NCBI NM_001024135.2 NP_001019306.2 Accepted alive Link to Nucleotide Sequence:NM_001024135.2Link to Protein Sequence:NP_001019306.2Re-query CCDS DB by Nucleotide ID:NM_001024135Re-query CCDS DB by Protein ID:NP_001019306Link to BLAST:NP_001019306.2

Chromosomal Locations for CCDS 27298.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 79426730 79428802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2073 nt):
ATGCAGTCCCGGGAAGACGCCCCGCGCTCTCGCCGCCTCGCCAGCCCCCGCGGCGGGAGGCGGCCCAAGA
GGATTTCCAAGCCCTCGGTGTCGGCCTTTTTCACGGGCCCGGAGGAATTAAAGGACGCGGCCCATTCCGC
AGCCCTCCTGGCACAGCTCAAGTCTTTCTACGACGCGCGGCTGCTGTGCGATGTGACCATCGAGGTGGTG
ACGCCTGGCAGCGGGCCGGGCACGGGGCGCCTCTTCTCGTGCAACCGCAACGTGCTGGCGGCCGCTTGCC
CCTACTTCAAGAGCATGTTCACGGGGGGCATGTACGAGAGCCAGCAGGCCAGCGTGACGATCCACGACGT
GGATGCCGAGTCCTTCGAGGTCTTGGTGGACTACTGCTACACTGGTCGCGTGTCGCTCAGCGAGGCCAAC
GTGCAGCGCCTGTACGCGGCCTCGGATATGCTGCAGCTGGAGTACGTGCGCGAAGCCTGTGCCTCCTTCC
TGGCTCGCCGCCTTGACCTGACCAATTGCACTGCCATCCTCAAGTTTGCCGATGCCTTTGACCACCACAA
GCTGCGATCTCAGGCCCAGTCCTTCATAGCTCACAACTTCAAGCAGCTCAGCAGGATGGGGTCCATTCGG
GAGGAGACGCTGGCAGATCTGACCCTGGCCCAGCTGCTGGCCGTCCTGCGTCTGGACAGCTTGGATGTAG
AGAGTGAGAAGACTGTGTGTCATGTGGCGGTGCAGTGGCTGGAGGCTGCTCCGAAAGAGCGGGGTCCCAG
TGCTGCGGAAGTCTTTAAGTGTATTCGTTGGGCGCACTTCCCTGCAGAAGAGCAGGACTACCTGGGAGGG
CTACTGAGCAAGCCTATTGTGAAGAAATACTGCCTGGACATTATTGAAGGGGCTCTCCGGCAGCTGCGAT
TTGGTGATAGGTTGTACAAGTCAGTGGTTGCCAAGCCAAATAGCAGCCACAGCAGTGATAGCAATAATAG
CAGCAATAGCAGCAGCAGCAGTAGCTCAGTTGTATCGGTAGCAGAAAATCCACCCCAAAGGTTGGGTATG
TGTGCCAAAGAGATGGTAATATTTTTTGGGCACCCCCGAGATCCATTTCTCTGTTACGACCCTTATTCCG
GAGATATTTACACAATGCCGTCTCCTTTGACTAGCTTGGCACACACTAAGACCATTACATCTTCAGCTGT
TTGTGTCTCTCCAGACCATGACATCTATCTTGCTGCCCAGCCCAGGAAAGACCTATGGGTGTATAAACCA
GCCCAAAATAGTTGGCATCAGCTGGCAGACCGCTTGCTGTGTCGAGAGGGTATGGATGTAGCCTATCTGA
ATGGCTACATTTACATCTTGGGTGGGAGAGACCCGATTACTGGAGTTAAATTGAAGGAAGTGGAATGCTA
CAGTGTCCAGAGGAACCAATGGGCATTGGTGGCTCCTGTACCACATTCCTTTTATTCATTTGAACTAATA
GTGGTTCAGAATTATCTTTACGCTGTCAACAGTAAGCGCATGCTCTGCTATGATCCTAGCCATAATATGT
GGCTGAATTGTGCATCTCTCAAACGAAGTGACTTTCAAGAAGCCTGTGTCTTCAAAGAGGAAATCTATTG
TATCTGTGACATCCCAGTCATGAAGGTCTACAACCCTGCTAGAGGAGAGTGGAGGCGGATTAGTAATATC
CCACTGGACTCAGAAACCCACAACTACCAGATTGTCAATCATGACCAAAAGTTGCTGCTCATCACCTCTA
CCACCCCACAGTGGAAAAAGAACCGAGTCACAGTATATGAGTATGATACTAGGGAAGACCAATGGATTAA
TATAGGCACCATGTTAGGCCTTTTGCAGTTTGACTCTGGCTTTATTTGCCTGTGTGATCGAGTTTATCCT
TCCTGTCTTGAACCTGGTCAGAGTTTCATCACTGAGGAAGATGATGCAAGGAGTGAGTCTAGCACTGAAT
GGGACTTAGATGGATTCAGTGAACTGGACTCTGAGTCAGGAAGTTCAAGTTCTTTTTCTGATGATGAAGT
CTGGGTACAAGTTGCGCCTCAGCGAAATGCACCAGATCAGTAG

Translation (690 aa):
MQSREDAPRSRRLASPRGGRRPKRISKPSVSAFFTGPEELKDAAHSAALLAQLKSFYDARLLCDVTIEVV
TPGSGPGTGRLFSCNRNVLAAACPYFKSMFTGGMYESQQASVTIHDVDAESFEVLVDYCYTGRVSLSEAN
VQRLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFADAFDHHKLRSQAQSFIAHNFKQLSRMGSIR
EETLADLTLAQLLAVLRLDSLDVESEKTVCHVAVQWLEAAPKERGPSAAEVFKCIRWAHFPAEEQDYLGG
LLSKPIVKKYCLDIIEGALRQLRFGDRLYKSVVAKPNSSHSSDSNNSSNSSSSSSSVVSVAENPPQRLGM
CAKEMVIFFGHPRDPFLCYDPYSGDIYTMPSPLTSLAHTKTITSSAVCVSPDHDIYLAAQPRKDLWVYKP
AQNSWHQLADRLLCREGMDVAYLNGYIYILGGRDPITGVKLKEVECYSVQRNQWALVAPVPHSFYSFELI
VVQNYLYAVNSKRMLCYDPSHNMWLNCASLKRSDFQEACVFKEEIYCICDIPVMKVYNPARGEWRRISNI
PLDSETHNYQIVNHDQKLLLITSTTPQWKKNRVTVYEYDTREDQWINIGTMLGLLQFDSGFICLCDRVYP
SCLEPGQSFITEEDDARSESSTEWDLDGFSELDSESGSSSSFSDDEVWVQVAPQRNAPDQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH