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Report for CCDS14855.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14855.1 Public Mus musculus 1 Adgrb3 23 108 98 CCDS HistoryNCBI Gene:210933Re-query CCDS DB by CCDS ID:14855.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14855.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041838.6 ENSMUSP00000035612.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041838.6Link to Ensembl Protein Viewer:ENSMUSP00000035612.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000041838Re-query CCDS DB by Protein ID:ENSMUSP00000035612
Original member Current member EBI ENSMUST00000151309.7 ENSMUSP00000116231.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000151309.7Link to Ensembl Protein Viewer:ENSMUSP00000116231.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000151309Re-query CCDS DB by Protein ID:ENSMUSP00000116231
Original member Current member EBI ENSMUST00000135518.7 ENSMUSP00000119804.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000135518.7Link to Ensembl Protein Viewer:ENSMUSP00000119804.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000135518Re-query CCDS DB by Protein ID:ENSMUSP00000119804
Original member Current member NCBI NM_175642.4 NP_783573.4 Accepted alive Link to Nucleotide Sequence:NM_175642.4Link to Protein Sequence:NP_783573.4Re-query CCDS DB by Nucleotide ID:NM_175642Re-query CCDS DB by Protein ID:NP_783573Link to BLAST:NP_783573.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783573.4 1522 Q80ZF8 1522 100% 0 0

Chromosomal Locations for CCDS 14855.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 25068168 25068356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25074685 25074789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25084244 25084279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25093765 25094408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25098876 25098915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25101433 25101528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25111692 25111863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25112177 25112275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25117289 25117374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25126641 25126707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25128819 25128888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25131251 25131401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25221760 25221862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25226720 25226823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25228421 25228547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25396436 25396479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25420558 25420660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25431423 25431498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25432427 25432576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25456992 25457100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25460743 25460811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25487925 25488119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25504433 25504539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25504913 25505014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25531870 25532034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25532475 25532639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25547416 25547580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25553675 25553836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25559755 25559865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 25826004 25826760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4569 nt):
ATGAAGGCTGTTCGTAACCTGCTGATTTATATATTTTCCACCTATCTCCTGGTTATGTTTGGATTTAATG
CTGCCCAAGACTTCTGGTGTTCCACTTTGGTGAAGGGAGTCATTTATGGATCCTATTCTGTAAGTGAAAT
GTTTCCCAAAAACTTTACAAACTGCACCTGGACACTGGAAAATCCAGATCCAACCAAATATAGCATTTAC
CTGAAATTTTCCAAAAAGGACCTTAGCTGCTCTAACTTTTCCCTTCTGGCTTATCAGTTTGATCATTTTT
CCCATGAAAAAATAAAGGATCTTTTGAGAAAGAACCATTCCATAATGCAACTTTGCAGTTCCAAGAATGC
TTTTGTTTTTCTACAGTACGATAAAAATTTCATTCAGATACGCCGGGTATTTCCAACTGATTTCCCAGGA
TTACAGAAAAAAGTCGAAGAGGATCAGAAATCTTTTTTTGAGTTTTTGGTACTGAACAAGGTGAGCCCGA
GCCAGTTTGGTTGCCATGTCTTATGCACTTGGTTGGAAAGCTGCTTAAAATCCGAAAATGGGAGAACCGA
GTCTTGTGGAATTATGTACACAAAATGCACGTGCCCCCAGCACTTGGGAGAGTGGGGAATAGATGACCAG
TCCCTGGTTCTGTTAAATAACGTCGTGTTACCCCTGAATGAGCAGACGGAGGGTTGCCTGACTCAGGAGC
TGCAAACTACTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAGAAGAATTTGGAATGAT
GGGAGATCATACAATTAAAAGTCAGCGACCTCGATCTGTCCATGAGAAAAGGGTCCCTCAGGAACAAGCT
GATGCTGCTAAATTTATGGCACAAACTGGTGAATCTGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCT
CAGTTACTTGTGGTCAAGGGTCGCAGGTGCGAACCAGAACTTGTGTATCACCTTACGGGACACACTGCAG
CGGCCCATTAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAGTACATGGAGTTTGGGAGGAA
TGGTCACCTTGGAGCTTATGCTCCTTCACATGTGGCCGAGGCCAAAGAACACGAACCAGGTCATGCACAC
CTCCTCAGTATGGAGGAAGGCCCTGTGAGGGACCTGAAACTCATCACAAGCCTTGTAATATTGCCCTCTG
TCCAGTTGACGGACAGTGGCAGGAATGGAGTTCATGGAGCCACTGCTCAGTGACATGTTCTAATGGGACA
CAGCAGAGGAGTCGGCAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTGCCGAGGACCATGGGCTGAAA
GCAGGGAGTGCTACAACCCTGAATGTACAGCCAATGGTCAGTGGAATCAGTGGGGTCACTGGAGTGGATG
TTCCAAGTCCTGTGATGGTGGCTGGGAGAGGAGAATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAG
CAGTGTGAAGGCACAGGTGAAGAGGTACGAAGATGCAGTGAGCAGCGGTGCCCAGCACCTTATGAAATAT
GCCCAGAGGATTATCTTATATCAATGGTGTGGAAAAGGACTCCTGCAGGCGACCTGGCATTCAATCAATG
TCCACTGAATGCCACAGGCACCACTAGCAGACGCTGCTCTCTCAGTCTTCATGGAGTGGCCTCCTGGGAA
CAGCCGAGCTTTGCAAGATGCATATCCAATGAGTACAGACACTTGCAGCATTCAATTAAAGAGCACCTTG
CGAAGGGGCAGCGGATGCTGGCAGGTGATGGAATGTCCCAGGTCACCAAGACACTATTGGATTTAACCCA
GAGGAAAAATTTCTATGCAGGTGACCTTCTGGTGTCTGTGGAAATCCTGAGAAATGTGACAGACACGTTT
AAAAGGGCAAGTTACATCCCTGCGTCTGATGGGGTCCAGAACTTCTTTCAAATAGTTAGCAACCTTCTTG
ATGAAGAAAACAAGGAGAAATGGGAAGACGCACAACAGATTTACCCAGGCTCAATAGAGTTAATGCAGGT
GATTGAAGATTTTATACACATTGTTGGAATGGGGATGATGGACTTTCAAAATTCATACCTAATGACTGGA
AATGTAGTGGCGAGCATTCAGAAGCTCCCTGCTGCATCTGTTCTAACCGACATCAACTTCCCCATGAAAG
GCCGGAAAGGAATGGTAGACTGGGCAAGAAATTCAGAAGATCGCGTTGTGATTCCAAAAAGCATTTTCAC
TCCCGTGTCTTCAAAAGAATTAGATGAATCATCTGTTTTTGTTCTTGGAGCGGTCCTATACAAAAACTTA
GACCTAATTTTGCCTACTTTGAGAAATTACACTGTCGTCAATTCTAAAGTCATCGTGGTCACAATCAGGC
CTGAACCTAAAACAACTGACTCATTTTTGGAGATAGAGCTAGCTCACTTGGCAAATGGCACTTTGAATCC
ATATTGCGTGTTATGGGATGACTCAAAATCGAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAA
ACTGTGCTTACCGATGCATCCCATACGAAATGCTTATGTGATCGGCTCTCTACCTTCGCCATTTTGGCTC
AGCAACCTAGAGAAATAGTCATGGAATCCTCTGGTACCCCCTCAGTTACCCTCATAGTAGGCAGTGGCCT
CTCCTGCCTGGCCTTGATAACTCTAGCAGTTGTGTACGCAGCACTATGGAGGTATATTCGCTCTGAGAGG
TCCATCATTCTAATTAACTTCTGCCTGTCTATCATCTCATCCAATATCCTCATACTGGTTGGACAGACTC
AGACACACAATAAGAGCATCTGCACGACCACCACCGCGTTCCTGCATTTTTTCTTCCTGGCTTCATTCTG
TTGGGTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGTGACAGGAAAAATCAGGACCCGGCTTATAAGA
AAACGCTTTTTGTGCCTTGGATGGGGGCTGCCAGCTTTAGTAGTGGCCACATCTGTAGGCTTCACTAGGA
CGAAAGGATACGGCACGGATCACTACTGCTGGCTGTCTCTAGAAGGAGGACTGCTCTATGCCTTCGTTGG
ACCTGCAGCGGCTGTTGTCCTGGTCAACATGGTGATTGGCATTTTGGTATTTAATAAACTTGTTTCCAGA
GATGGGATCCTAGATAAAAAGCTAAAACACAGAGCCGGTCAGATGAGTGAGCCTCATAGCGGTCTGACGC
TCAAATGTGCCAAGTGTGGAGTAGTTTCTACAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCATGGC
CTCTCTTTGGAGCTCCTGTGTGGTGCTACCGCTTCTGGCTCTGACATGGATGTCTGCAGTTCTGGCCATG
ACAGATAAACGCTCCATATTGTTTCAGATACTTTTTGCCGTGTTTGATTCATTACAAGGCTTTGTGATAG
TCATGGTCCACTGCATTCTTCGGAGAGAGGTTCAAGATGCATTTAGATGCCGGTTGAGAAACTGCCAGGA
TCCAATCAATGCTGATTCTTCAAGTTCTTTTCCTAATGGACATGCTCAAATCATGACAGACTTTGAAAAG
GACGTAGACATTGCTTGCCGATCAGTGCTTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAACAG
GAACACTCTCCAGGATTTCTCTAAATGATGATGAGGAAGAAAAGGGAACAAACCCTGAAGGGCTAAGCTA
CTCAACATTGCCTGGAAATGTCATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTGCACATGCCTATG
AGTATGAACGAGCTAAGCAATCCGTGTCTGAAAAAAGAGAACACTGAACTGCGGAGAACTGTGTACTTAT
GCACGGATGACAATCTGAGAGGGGCCGATATGGACATTGTCCACCCCCAAGAACGAATGATGGAAAGTGA
CTATATTGTGATGCCTAGAAGTTCTGTAAGCACCCAGCCATCAATGAAAGAGGAGAGCAAGATGAATATT
GGCATGGAAACCTTGCCGCATGAAAGGCTATTACACTACAAAGTAAACCCTGAATTCAATATGAATCCCC
CCGTAATGGACCAGTTTAATATGAACTTAGATCAGCATCTTGCACCCCAGGAACATATGCAGAATTTACC
CTTTGAGCCTCGCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGGATGATAATGTGGGACTGTCAAGA
AGTGAAACTGGATCAACGATATCAATGAGTTCTCTAGAGAGAAGAAAATCGCGGTATTCTGACCTTGACT
TTGAGAAGGTCATGCACACAAGGAAGAGGCACATGGAATTGTTTCAGGAACTAAATCAGAAGTTTCAGAC
TTTGGACAGATTTCGGGACATACCAAACACAAGCAGTATGGAAAACCCAGCACCAAACAAGAATCCATGG
GACACTTTCAAACCCCCCAGTGAATACCAACATTACACCACAATCAATGTCTTAGACACGGAGGCAAAGG
ATACTCTGGAGCTGAGGCCGGCCGAGTGGGAGAAGTGTCTGAATTTGCCTCTGGATGTGCAAGAGGGTGA
TTTTCAAACAGAAGTGTAA

Translation (1522 aa):
MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIY
LKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPG
LQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGRTESCGIMYTKCTCPQHLGEWGIDDQ
SLVLLNNVVLPLNEQTEGCLTQELQTTQVCNLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQA
DAAKFMAQTGESGVEEWSQWSACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEE
WSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGT
QQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMRTCQGAAVTGQ
QCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATGTTSRRCSLSLHGVASWE
QPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTF
KRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTG
NVVASIQKLPAASVLTDINFPMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNL
DLILPTLRNYTVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCK
TVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSER
SIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIR
KRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSR
DGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAM
TDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEK
DVDIACRSVLHKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPM
SMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQPSMKEESKMNI
GMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTAVKNFMASELDDNVGLSR
SETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQELNQKFQTLDRFRDIPNTSSMENPAPNKNPW
DTFKPPSEYQHYTTINVLDTEAKDTLELRPAEWEKCLNLPLDVQEGDFQTEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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