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Report for CCDS18570.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18570.1 Public Mus musculus 4 Zfp691 23 108 98 CCDS HistoryNCBI Gene:195522Re-query CCDS DB by CCDS ID:18570.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18570.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052715.9 ENSMUSP00000053013.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052715.9Link to Ensembl Protein Viewer:ENSMUSP00000053013.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000052715Re-query CCDS DB by Protein ID:ENSMUSP00000053013
Original member Current member EBI ENSMUST00000106355.4 ENSMUSP00000101962.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106355.4Link to Ensembl Protein Viewer:ENSMUSP00000101962.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000106355Re-query CCDS DB by Protein ID:ENSMUSP00000101962
Original member Current member EBI ENSMUST00000179290.7 ENSMUSP00000136119.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179290.7Link to Ensembl Protein Viewer:ENSMUSP00000136119.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179290Re-query CCDS DB by Protein ID:ENSMUSP00000136119
Original member Current member NCBI NM_001145935.1 NP_001139407.1 Accepted alive Link to Nucleotide Sequence:NM_001145935.1Link to Protein Sequence:NP_001139407.1Re-query CCDS DB by Nucleotide ID:NM_001145935Re-query CCDS DB by Protein ID:NP_001139407Link to BLAST:NP_001139407.1
Original member Current member NCBI NM_001145936.1 NP_001139408.1 Accepted alive Link to Nucleotide Sequence:NM_001145936.1Link to Protein Sequence:NP_001139408.1Re-query CCDS DB by Nucleotide ID:NM_001145936Re-query CCDS DB by Protein ID:NP_001139408Link to BLAST:NP_001139408.1
Original member Current member NCBI NM_183140.3 NP_898963.2 Accepted alive Link to Nucleotide Sequence:NM_183140.3Link to Protein Sequence:NP_898963.2Re-query CCDS DB by Nucleotide ID:NM_183140Re-query CCDS DB by Protein ID:NP_898963Link to BLAST:NP_898963.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139407.1 283 Q3TDE8 283 99.6466% 0 1
NP_001139408.1 283 Q3TDE8 283 99.6466% 0 1
NP_898963.2 283 Q3TDE8 283 99.6466% 0 1

Chromosomal Locations for CCDS 18570.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 119170182 119171033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGGGCAGCGAGAAGGAGCAGCGTCCCGAAGCTCACCTGCCCGAGGAAGGAGAAGGGGCTAAACCTTGGA
GAGTGGATGGCTCAAAGGATTCTCAGATCACACCTCGGGAGGATCATGGGCAGGAGAGCCTGTTGGCAGG
GCTCCACGGAACGCATCCACCAAAGACAAGGCAGAAAGTCACTGCCCAAGCCGGAGGCCCCAGGGATCCC
ATGCTTTTTTCAAGCCCAGAGACAGATGAGAAGCTTTTTATATGTGCGCAGTGTGGCAAAACCTTCAACA
ATACCTCCAACCTGAGAACGCACCAGCGGATCCACACTGGCGAGAAGCCCTACAAGTGTTCCGAGTGTGG
CAAGAGTTTCTCCCGGAGCTCCAACCGCATCCGGCACGAGCGCATCCACCTGGAAGAGAAGCACTACCAA
TGCGCCAAGTGTCAGGAGAGCTTCCGGCGGCGCTCGGACCTCACCACGCACCAGCAAGATCACCTGGGCC
AGCGGCCCTACCGCTGTGACATTTGTGGCAAGAGCTTCACTCAGAGCTCCACGCTGGCTGTACATCACCG
GACCCACCTGGAGCCAGCCCCTTACATCTGCTGTGAGTGTGGGAAGAGCTTTAGCAACAGCTCCAGCTTT
GGGGTGCACCACCGTACCCACACGGGTGAGAGGCCTTACGAGTGCACTGAATGCGGGCGGACTTTCAGTG
ATATCTCCAACTTTGGTGCACACCAGAGAACGCACAGAGGGGAGAAGCCGTACAGGTGCACCCTGTGTGG
GAAACACTTCTCCCGGAGCTCCAACCTCATCCGACACCAGAAAACACACTTGGGCGAGCAAGATGAGAAG
GATTTTAGCTAA

Translation (283 aa):
MGSEKEQRPEAHLPEEGEGAKPWRVDGSKDSQITPREDHGQESLLAGLHGTHPPKTRQKVTAQAGGPRDP
MLFSSPETDEKLFICAQCGKTFNNTSNLRTHQRIHTGEKPYKCSECGKSFSRSSNRIRHERIHLEEKHYQ
CAKCQESFRRRSDLTTHQQDHLGQRPYRCDICGKSFTQSSTLAVHHRTHLEPAPYICCECGKSFSNSSSF
GVHHRTHTGERPYECTECGRTFSDISNFGAHQRTHRGEKPYRCTLCGKHFSRSSNLIRHQKTHLGEQDEK
DFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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