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Report for CCDS26302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26302.1 Public Mus musculus 13 Zfp184 23 108 98 CCDS HistoryNCBI Gene:193452Re-query CCDS DB by CCDS ID:26302.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26302.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006903.7 ENSMUSP00000006903.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006903.7Link to Ensembl Protein Viewer:ENSMUSP00000006903.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000006903Re-query CCDS DB by Protein ID:ENSMUSP00000006903
Original member Current member EBI ENSMUST00000102978.7 ENSMUSP00000100043.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102978.7Link to Ensembl Protein Viewer:ENSMUSP00000100043.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000102978Re-query CCDS DB by Protein ID:ENSMUSP00000100043
Original member Current member EBI ENSMUST00000176511.7 ENSMUSP00000135173.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176511.7Link to Ensembl Protein Viewer:ENSMUSP00000135173.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176511Re-query CCDS DB by Protein ID:ENSMUSP00000135173
Original member Current member NCBI NM_183014.1 NP_898835.1 Accepted alive Link to Nucleotide Sequence:NM_183014.1Link to Protein Sequence:NP_898835.1Re-query CCDS DB by Nucleotide ID:NM_183014Re-query CCDS DB by Protein ID:NP_898835Link to BLAST:NP_898835.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898835.1 737 Q7TSH9 737 100% 0 0

Chromosomal Locations for CCDS 26302.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 21945793 21945799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 21947003 21947070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 21949660 21949786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 21950234 21950329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 21958424 21960339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2214 nt):
ATGGCAGGTCTGTCCTTTGCAGACTCTGCCAGTCTCCACGAGGGACGTCCCCTACTCCTACCATCTAGTT
TTCGGGAATCAGTGACCTTCAAGGATGTGGTCGTGAACTTCACTCAGGAAGAATGGAAACACCTGGATCC
TATACAGAGAGATTTGTTCAGAGATGTGACACTGGAAAATTATACACATCTGGTCTCTATAGGGCTCCAG
GTTTCCAAACCTGATATGATTTCCCAACTAGAGCAAGGGACAGAGCCATGGACTGAGGATTCGTGCATTC
CTGTCGGTCCCTTGGAAGACTGGAAGAAAAGAGCTGGAAATAGTGTGTCATCCCTAGAACTTGACATTTC
TGAAGAGCATCTATTCTCAGAGACAGTAGTAACCAACAGCAAAAGGGATGATGGGAGTTTAGAGAAGCTT
CAAGCAAACCAACAGATGCTGCCAAGGGAAGTCCAAATAACGGAGAAAACAGCACCCACTTGTGAGAGCA
ACCTCAGTGTGAGCTCAAGCTTCATAACACAAACGGAAGTAGCTCTCGATCAGCCTTCCACTAAAACAAG
AGCCAAGCAGAATTCCCACCCAGTTAAAAAGGAGAAGCTGTGTAAGTGCAACGAATGTGGTAAAGCTTTT
ACTTACTGTTCTGCTCTCATTCGCCACCAAAGAACGCATACTGGAGAGAAACCCTATAAATGTAATGAAT
GTAACAAAGCTTTCAGCAGAAGTGAAAACCTTATAAACCATCAGAGAATCCATACGGGAGATAAACCGTA
CAAATGTGACCAGTGTGGAAAGGGTTTCATTGAGGGTCCATCTCTCACTCAACATCAAAGAATTCACACT
GGAGAAAAGCCCTATAAATGTGATGAATGTGGGAAGGCCTTTAGTCAGAGGACCCATCTTGTTCAGCATC
AGAGAATTCACACTGGTGAGAAGCCATATACTTGTACCGAGTGTGGGAAATCCTTCAGCCAGAGAGGTCA
CTTTATGGAGCACCAGAAAATTCATACAGGAGAAAAACCTTTCAAGTGTGAGGAGTGTGAGAAAACCTTC
ACCAGGAGCACACACCTCACTCAACATCAGAAAATTCACACTGGGGAGAAAACTTACAAGTGTAATGAAT
GTGGGAAGGCCTTCAACGGCCCATCAACGTTTATCCGTCACCATATGATTCATACTGGAGAAAAGCCTTA
TGAGTGTAATGAATGTGGCAAAGCCTTCAGCCAGCACTCCAACCTGACTCAGCATCAGAAAACACACACT
GGGGAGAAACCCTATGACTGTGCAGAATGTGGGAAAGCCTTTAGTTACTGGTCATCCCTAGCTCAGCACC
TGAAAATTCATACAGGAGAGAAGCCCTACAAGTGTAGCGACTGCGGGAAGGCCTTCAGTTACTGCTCCTC
CCTTACTCAGCATCGGAGGATTCACACCCGAGAGAAGCCCTTTGAGTGCAGTGAGTGTGGAAAGGCTTTC
AGCTATCTGTCAAACCTTAATCAGCATCAGAAAACTCACACCCAGGAGAAAGCCTATGAATGTAAGGAAT
GTGGGAAAGCCTTTATTCGGAGTTCATCTCTTGCTAAGCATGAAAGAATTCATACTGGAGAGAAGCCTTA
TCAATGTCATGAATGTGGAAAAACCTTCAGCTATGGCTCATCTCTTATTCAGCATAAGAAAATCCATACT
GGTGAAAGACCTTACAAGTGTAATGAATGTGGGCGAGCCTTCAACCAGAAAATACACCTTACACAACACA
AGAGAATTCATACAGGAGCAAAGCCGTATGCCTGCCCCAAGTGCGGGAAGACCTTTCGACACTGTTCATC
TCTTGCTCAACATCAAAAAACTCACACAGAAGAAAAACCCTACCAGTGTAACAAATGTGAAAAAACCTTC
AGCCAGAACTCCCGTCTGACTCAGCATCAGCGAATTCATACGGGAGAGAAGCCTTATAAGTGCAGTGAAT
GTGACAAATGCTTTACCGGGAGCGTGCACCTGACTGAACATCGGAGTACTCACACTGGAGAGAAACCTTA
CAACTCTGAGTGCCCACAGACTTTCAGCCAGAGCACATACCTCACTCAGCATCAGAAGATTCATTCAGGA
GAGAAGCTTTTGGGGTGTGAGGACTGTGAAAAAGCCTTCCAGTGTCACTCTGCTCTCACCAAACACCAGA
GATTGCACCCTGCTGTGGCTGCTGTAGGAACATCATTAACATAG

Translation (737 aa):
MAGLSFADSASLHEGRPLLLPSSFRESVTFKDVVVNFTQEEWKHLDPIQRDLFRDVTLENYTHLVSIGLQ
VSKPDMISQLEQGTEPWTEDSCIPVGPLEDWKKRAGNSVSSLELDISEEHLFSETVVTNSKRDDGSLEKL
QANQQMLPREVQITEKTAPTCESNLSVSSSFITQTEVALDQPSTKTRAKQNSHPVKKEKLCKCNECGKAF
TYCSALIRHQRTHTGEKPYKCNECNKAFSRSENLINHQRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHT
GEKPYKCDECGKAFSQRTHLVQHQRIHTGEKPYTCTECGKSFSQRGHFMEHQKIHTGEKPFKCEECEKTF
TRSTHLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQHSNLTQHQKTHT
GEKPYDCAECGKAFSYWSSLAQHLKIHTGEKPYKCSDCGKAFSYCSSLTQHRRIHTREKPFECSECGKAF
SYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTGEKPYQCHECGKTFSYGSSLIQHKKIHT
GERPYKCNECGRAFNQKIHLTQHKRIHTGAKPYACPKCGKTFRHCSSLAQHQKTHTEEKPYQCNKCEKTF
SQNSRLTQHQRIHTGEKPYKCSECDKCFTGSVHLTEHRSTHTGEKPYNSECPQTFSQSTYLTQHQKIHSG
EKLLGCEDCEKAFQCHSALTKHQRLHPAVAAVGTSLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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