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Report for CCDS21326.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21326.1 Public Mus musculus 7 Ndn 23 108 98 CCDS HistoryNCBI Gene:17984Re-query CCDS DB by CCDS ID:21326.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21326.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038775.5 ENSMUSP00000045369.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038775.5Link to Ensembl Protein Viewer:ENSMUSP00000045369.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000038775Re-query CCDS DB by Protein ID:ENSMUSP00000045369
Original member Current member NCBI NM_010882.3 NP_035012.2 Accepted alive Link to Nucleotide Sequence:NM_010882.3Link to Protein Sequence:NP_035012.2Re-query CCDS DB by Nucleotide ID:NM_010882Re-query CCDS DB by Protein ID:NP_035012Link to BLAST:NP_035012.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035012.2 325 P25233 325 100% 0 0

Chromosomal Locations for CCDS 21326.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 62348408 62349385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGTCGGAACAAAGTAAGGACCTGAGCGACCCTAACTTTGCAGCCGAGGTCCCCGACTGTGAGATGCAGG
ACAGCGATGCCGTTCCGGTGGGGATCCCTCCTCCCGCTTCTCTGGCCGCTAACCTCGCAGGGCCACCGTG
CGCTCCCGAAGGCCCTATGGCAGCCCAACAGGCCTCGCCACCGCCCGAAGAACGGATAGAAGATGTTGAC
CCTAAAATCCTGCAGCAGGCCGCAGAGGAGGGCCGCGCCCACCAGCCCCAGAGTCCAGCCCGGCCGATCC
CAGCACCGCCAGCCCCTGCCCAGCTGGTGCAGAAGGCGCACGAGCTCATGTGGTACGTGTTGGTGAAGGA
CCAGAAGAGGATGGTCCTCTGGTTTCCAGACATGGTGAAAGAGGTCATGGGCAGCTACAAGAAATGGTGC
AGAAGCATCCTCAGGCGCACCAGCGTCATCCTCGCCAGAGTGTTCGGGCTGCACCTGAGGCTGACCAATC
TCCACACCATGGAGTTTGCCCTGGTCAAAGCCCTCAGCCCAGAGGAGCTAGACAGGGTGGCGCTCAACAA
CCGTATGCCCATGACAGGCCTCCTGCTCATGATCCTGAGCCTCATCTATGTGAAGGGCCGCGGGGCCAGA
GAGGGTGCGGTCTGGAATGTGCTGCGCATCCTGGGGCTGAGGCCCTGGAAGAAGCACTCCACCTTCGGAG
ACGTGAGGAAGATAATCACCGAGGAGTTCGTCCAGCAGAATTACCTGAAGTACCAGCGTGTGCCCCACAT
CGAGCCTCCCGAGTACGAGTTCTTCTGGGGGTCCAGAGCTAACCGTGAAATCACCAAGATGCAGATCATG
GAGTTCCTGGCCAGAGTCTTCAAGAAAGATCCCCAGGCGTGGCCTTCCCGATACAGGGAGGCTCTGGAGC
AGGCCAGAGCTCTGCGGGAGGCTAATCTTGCTGCCCAGGCCCCCCGCAGCAGTGTCTCTGAGGACTAA

Translation (325 aa):
MSEQSKDLSDPNFAAEVPDCEMQDSDAVPVGIPPPASLAANLAGPPCAPEGPMAAQQASPPPEERIEDVD
PKILQQAAEEGRAHQPQSPARPIPAPPAPAQLVQKAHELMWYVLVKDQKRMVLWFPDMVKEVMGSYKKWC
RSILRRTSVILARVFGLHLRLTNLHTMEFALVKALSPEELDRVALNNRMPMTGLLLMILSLIYVKGRGAR
EGAVWNVLRILGLRPWKKHSTFGDVRKIITEEFVQQNYLKYQRVPHIEPPEYEFFWGSRANREITKMQIM
EFLARVFKKDPQAWPSRYREALEQARALREANLAAQAPRSSVSED


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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