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Report for CCDS53164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53164.1 Public Mus musculus X Nap1l2 23 108 98 CCDS HistoryNCBI Gene:17954Re-query CCDS DB by CCDS ID:53164.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53164.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121720.1 ENSMUSP00000112677.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121720.1Link to Ensembl Protein Viewer:ENSMUSP00000112677.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121720Re-query CCDS DB by Protein ID:ENSMUSP00000112677
Original member NCBI NM_008671.2 NP_032697.2 Updated not alive Link to Nucleotide Sequence:NM_008671.2Link to Protein Sequence:NP_032697.2Re-query CCDS DB by Nucleotide ID:NM_008671Re-query CCDS DB by Protein ID:NP_032697
Current member NCBI NM_008671.3 NP_032697.2 Accepted alive Link to Nucleotide Sequence:NM_008671.3Link to Protein Sequence:NP_032697.2Re-query CCDS DB by Nucleotide ID:NM_008671Re-query CCDS DB by Protein ID:NP_032697Link to BLAST:NP_032697.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032697.2 460 P51860 460 100% 0 0

Chromosomal Locations for CCDS 53164.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103184928 103186310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGGCTGAATCAGTCGACCATAAAGAACTGTCTGAATCCAACCAAGAAGAGCTTGGCAGCCAGGTAATGG
CGGAGGGGCCCGGGGAAAGTCAGGACCGCAGTGAAGGTGTCTCCATTGAGCCTGGAGATGGCGGGCAACA
TGGTGAAGAAACCGTGGCTGCTGGAGTAGGGGAAGAGGGAAAAGGTGAAGAAGCTGCTGCAGGGTCTGGG
GAAGATGCTGGGAAGTGCGGAGGCACTGATGAGGACTCAGACTCAGACCGTCCAAAAGGACTTATCGGTT
ATCTTTTAGATACCGATTTCGTTGAAAGTCTCCCAGTGAAAGTTAAGTGCCGAGTGCTAGCTCTTAAAAA
GCTTCAAACAAGAGCTGCCCATTTGGAATCCAAATTCCTGAGGGAATTTCATGACATTGAAAGGAAGTTT
GCTGAAATGTACCAACCCTTACTAGAAAAAAGACGACAGATCATCAATGCAGTCTATGAGCCCACAGAAG
AGGAATGTGAGTATAAATCGGACTGTGAGGACTATTTTGAGGAGGAGATGGATGAGGAGGAAGAGACTAA
CGGCAACGAAGACGGTATGGTGCATGAATACGTGGATGAAGATGATGGTTATGAGGACTGTTATTATGAT
TATGATGACGAGGAAGAAGAGGAGGAGGAAGATGACAGCGCTGGGGCCACCGGAGGAGAAGAGGTTAACG
AAGAGGATCCTAAGGGGATTCCGGATTTTTGGTTGACTGTTTTAAAAAATGTTGAAGCACTCACTCCTAT
GATTAAGAAATATGATGAGCCTATTCTGAAGCTGCTGACAGATATTAAAGTGAAGCTTTCGGATCCCGGG
GAGCCTCTCAGCTTCACACTCGAATTTCACTTCAAGCCCAATGAATATTTTAAAAATGAGCTGTTGACAA
AGACTTATGTGCTGAAGTCAAAGCTTGCATGCTACGATCCCCACCCTTATAGGGGAACTGCCATTGAGTA
CGCCACTGGCTGCGACATAGATTGGAACGAAGGGAAGAATGTCACTTTGAGAACCATCAAGAAGAAGCAG
AGACATCGCGTCTGGGGAACTGTCCGAACTGTGACTGAAGATTTTCCCAAGGACTCTTTCTTCAATTTCT
TCTCTCCTCATGGGATCAGCTTAAATGGAGGGGATGAAAATGATGATTTTTTACTTGGTCATAATCTGCG
TACTTACATAATTCCAAGATCAGTGTTATTTTTCTCAGGAGATGCACTTGAATCTCAGCAGGAGGGTGTA
GTTAGGGAAGTTAATGACGAAATATATGACAAAATTATTTATGATGATTGGATGGCTGCAATTGAAGAGG
TTAAAGCCTGTTGCAAAAATCTTGAGGCATTAGTAGAAGATATTGATCGTTAA

Translation (460 aa):
MAESVDHKELSESNQEELGSQVMAEGPGESQDRSEGVSIEPGDGGQHGEETVAAGVGEEGKGEEAAAGSG
EDAGKCGGTDEDSDSDRPKGLIGYLLDTDFVESLPVKVKCRVLALKKLQTRAAHLESKFLREFHDIERKF
AEMYQPLLEKRRQIINAVYEPTEEECEYKSDCEDYFEEEMDEEEETNGNEDGMVHEYVDEDDGYEDCYYD
YDDEEEEEEEDDSAGATGGEEVNEEDPKGIPDFWLTVLKNVEALTPMIKKYDEPILKLLTDIKVKLSDPG
EPLSFTLEFHFKPNEYFKNELLTKTYVLKSKLACYDPHPYRGTAIEYATGCDIDWNEGKNVTLRTIKKKQ
RHRVWGTVRTVTEDFPKDSFFNFFSPHGISLNGGDENDDFLLGHNLRTYIIPRSVLFFSGDALESQQEGV
VREVNDEIYDKIIYDDWMAAIEEVKACCKNLEALVEDIDR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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