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Report for CCDS37858.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37858.1 Public Mus musculus 18 Myo5b 23 108 98 CCDS HistoryNCBI Gene:17919Re-query CCDS DB by CCDS ID:37858.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37858.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074157.12 ENSMUSP00000073790.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074157.12Link to Ensembl Protein Viewer:ENSMUSP00000073790.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000074157Re-query CCDS DB by Protein ID:ENSMUSP00000073790
Original member Current member NCBI NM_201600.2 NP_963894.1 Accepted alive Link to Nucleotide Sequence:NM_201600.2Link to Protein Sequence:NP_963894.1Re-query CCDS DB by Nucleotide ID:NM_201600Re-query CCDS DB by Protein ID:NP_963894Link to BLAST:NP_963894.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_963894.1 1818 P21271-1 1818 99.945% 0 1

Chromosomal Locations for CCDS 37858.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 74442781 74442807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74569767 74569877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74577455 74577626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74580390 74580534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74616923 74617079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74625562 74625705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74627171 74627252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74634461 74634568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74638042 74638151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74643927 74644192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74653360 74653441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74653930 74654070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74661607 74661729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74662663 74662746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74676601 74676756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74677421 74677518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74682549 74682635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74695372 74695483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74698186 74698397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74700572 74700728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74701445 74701684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74707864 74708097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74713548 74713632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74714826 74714959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74715959 74716078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74716970 74717107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74720837 74720902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74722333 74722572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74723757 74723857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74731645 74731843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74733911 74734004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74736146 74736289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74740474 74740625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74742126 74742215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74744621 74744771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74759027 74759312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74760850 74761024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74762576 74762656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 74770297 74770449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5457 nt):
ATGTCGTACAGCGAGCTCTACACCCGGTACACAAGGGTCTGGATCCCTGACCCAGATGAGGTGTGGCGCT
CGGCTGAATTAACCAAGGACTACAAAGAAGGGGATAAGAGCCTGCAGCTCAGACTAGAAGATGACACAAT
TCTAGAATACCCAGTTGATGTCCAAAATAACCAGGTGCCATTCTTGCGGAATCCAGATATCTTAGTAGGA
GAAAACGACCTCACTGCCCTCAGCCACCTCCACGAGCCCGCAGTTCTGCATAACTTAAAGGTCCGTTTCC
TGGAATCCAACCACATCTACACTTACTGTGGAATTGTGCTTGTTGCCATCAACCCCTACGAGCAGCTGCC
AATCTACGGACAGGATGTCATCTATGCCTACAGTGGCCAAAACATGGGTGACATGGACCCCCACATCTTT
GCTGTGGCAGAAGAAGCCTACAAGCAGATGGCCAGAGATGAAAAGAACCAATCCATCATAGTCAGCGGAG
AGTCTGGAGCAGGCAAGACGGTGTCGGCCAAGTACGCCATGCGCTATTTTGCCACCGTTGGTGGCTCAGC
CAGTGATACCAACATTGAAGAGAAGGTCCTAGCATCCAGCCCCATCATGGAGGCCATTGGGAACGCCAAG
ACTACTCGCAACGACAACAGCAGCCGATTTGGGAAATTCATTGAGATTGGCTTTGATAAAAAGTACCACA
TCATTGGGGCCAACATGAGGACCTACTTGCTGGAGAAGTCCAGGGTGGTCTTTCAGGCGGATGACGAGAG
GAACTACCACATCTTTTACCAGCTCTGTGCTGCTGCCAGCCTTCCTGAATTTAAAGAGCTCGCCCTAACG
TGCGCAGAGGACTTTTTCTATACAGCCCATGGAGGAAACACGACCATCGAGGGTGTGAATGATGCAGACG
ACTTTGAGAAGACTAGACAAGCCCTCACACTCCTGGGAGTGCGGGATTCCCATCAAATAAGCATCTTTAA
GATAATTGCTTCTATCTTGCACCTGGGAAGTGTGGAGATTCAGTCTGAGCGGGACGGGGATTCCTGCAGC
ATTTCACCCCAGGATGAACACTTGAGCAACTTCTGCAGCCTGCTAGGAATAGAACACAGCCAGATGGAGC
ACTGGCTGTGTCATCGGAAGCTGGTCACCACCTCAGAGACCTACGTCAAGACCATGTCCCTGCAGCAAGT
GGTCAATGCACGTGATGCCTTAGCCAAGCACATCTATGCTCAGCTGTTCTCCTGGATTGTGGAGCACATC
AACAAAGCCCTGCACACCTCCCTTAAGCAGCACTCCTTCATCGGGGTCCTGGATATCTATGGGTTTGAGA
CCTTCGAGATCAATAGCTTTGAACAGTTTTGTATCAACTACGCCAATGAAAAGCTCCAGCAACAGTTCAA
TTCGCATGTGTTCAAGCTGGAGCAAGAAGAATATATGAAGGAGCAGATCCCGTGGACTTTGATTGACTTC
TACGATAACCAACCGTGTATAGACCTCATAGAGGCAAAGCTGGGCATCCTGGACCTGTTGGATGAGGAGT
GTAAGGTCCCCAAAGGAACTGATCAGAACTGGGCCCAGAAACTCTACGAACGACACTCCAACAGCCAGCA
CTTCCAGAAACCACGCATGTCCAACACGGCCTTCATTGTCAACCACTTTGCAGATAAGGTGGAGTACCTT
TCAGATGGTTTTCTAGAGAAAAACAGGGATACAGTATATGAAGAACAGATCAACATCCTGAAGGCCAGCA
AGTTCCCATTAGTGGCTGATTTGTTCCACGATGACAAGGACTCTGCTCCAGCCACCAACACAGCTAAGAA
TCGATCATCTTCAAAGATCAACGTTCGCTCTTCCAGACCCCTCATCAAAGTCCCTAACAAGGAGCACAAG
AAATCCGTGGGCTACCAGTTTCGTACTTCCCTAAACCTGCTTATGGAGACCCTGAATGCCACAACGCCAC
ACTATGTCCGGTGCATCAAGCCCAACGATGAAAAGCTTCCCTTCCACTTTGACCCCAAGAGAGCTGTACA
GCAACTCCGAGCCTGCGGTGTGCTGGAGACCATTCGGATCAGCGCGGCAGGCTACCCATCCAGGTGGACC
TACCATGACTTCTTCAACCGGTATCGGGTGTTGATGAAGAAGAGAGAGCTCACCAACACCGACAAGAAGA
ATATCTGCAAGTCTGTCCTGGAGAGTCTCATCAAGGACCCAGACAAGTTCCAGTTTGGCCGCACCAAGAT
CTTCTTCCGAGCAGGCCAGGTGGCCTACCTGGAGAAGCTTCGGGCAGACAAGTTCCGGGAAGCTACTATC
ATGATCCAGAAGTCGGTCAGGGGATGGCTGCAGAGAGTGAAGTACCGTAGGCTGAGGGCAGCTACCTTAT
CCCTGCAGAGGTTCTGCAGGGGATACCTAGCCCGCAGGCTGGCCGAACACTTGAGGAGAACCCGGGCCGC
CATCGTGTTCCAGAAGCAGTACCGCATGCTGAAGGCCCGCCGAGCCTACCGCAGGGTCTGCAGGGCTACC
GTCATCATCCAGTCCTTCACACGGGCCATGTTTGTGCGCAGGAACTACCGCCAGGTCCTCATGGAGCACA
AAGCCACCATCATCCAGAAGTACGCCCGAGGCTGGATGGCACGGAAGCGTTTTCTGCGGGAGCGGGATGC
AGCCATTGTCATCCAGTGTGCCTTCCGGAGACTCAAGGCCAGGCAGGAGCTGAAGGCCCTCAAGATTGAG
GCCCGCTCGGCAGAGCATCTGAAACGCCTCAACGTGGGCATGGAGAACAAAGTCGTCCAGCTACAGCGGA
AGATTGATGACCAGAACAAAGAGTTCAAGACTCTGTCAGAGCAGCTGTCTGCAGTCACCTCCAGTCATGC
CGTGGAGGTGGAGAAGCTGAAGAAGGAGCTGGCACATTACCAGCAGAACCAGGAGGCTGATACCAGCCTT
CAGCTGCAGGAGGAGGTTCAGAGCCTGCGCACTGAACTACAGAAGGCTCATTCGGAGCGCAGGGTCCTGG
AGGATGCTCACAACAAGGAGAATGGCGAGCTGAGAAAGCGAGTTGCAGACCTGGAACATGAAAATGCCCT
CTTGAAGGATGAAAAAGAATACCTTAACAACCAAATCCTGTGCCAGTCAAAAGCTGAATCTTCGCAGAGC
TCTGTGGAAGAGAACCTCCTGATGAAGAAGGAGCTGGAGGAGGAACGGTCCAGGTACCAGAACCTCGTGA
AGGAGTACTCCCAGCTGGAGCAGAGATATGAGAACCTTCGGGACGAGCAAACTCCGGGCCACAGGAAGAA
CCCATCGAACCAAAGCAGCTTAGAATCTGACTCCAATTACCCCTCCATTTCCACTTCCGAAATCGGAGAC
ACTGAGGATGCCCTTCAGCAGGTGGAGGAGATTGGCATAGAGAAGGCAGCCATGGACATGACCGTCTTCC
TGAAGCTGCAGAAGAGAGTGCGCGAACTTGAGCAGGAGAGGAAGAAGCTGCAGGCACAGCTAGAAAAGGG
ACAGCAGGACAGCAAGAAAGGGCAGGTAGAACAACAGAACAATGGCTTAGATGTGGACCAGGACGCAGAT
ATAGCCTACAATAGTCTGAAGAGACAGGAGCTTGAGTCAGAGAACAAGAAGCTGAAGAATGACCTGAATG
AGCTGAGGAAGGCTGTCGCTGACCAAGCCATGCAGGATAACTCCACCCACAGCTCCCCAGACAGCTACAG
CCTCCTCCTGAACCAGCTCAAGCTGGCCAATGAGGAGCTCGAGGTCCGCAAAGAGGAGGTGCTGATCCTC
AGGACCCAGATCATGAATGCCGACCAGCGCCGCCTGTCTGGCAAGAACATGGAGCCGAACATCAATGCCA
GAACAAGTTGGCCCAACAGTGAGAAGCACGTGGACCAGGAAGACGCCATTGAGGCCTATCACGGGGTCTG
CCAGACAAACAGGTTGCTGGAGGCCCAGCTGCAGGCCCAGAGCCTGGAGCATGAGGAGGAGGTGGAACAT
CTCAAGGCCCAGGTGGAAGCCCTGAAAGAGGAGATGGACAAACAGCAGCAGACCTTCTGCCAGACCCTGC
TGCTCTCCCCAGAGGCCCAGGTAGAATTTGGTGTCCAGCAGGAGATATCCCGGCTGACCAATGAGAACCT
GGATTTTAAGGAATTGGTGGAAAAGCTGGAGAAGAATGAGAGGAAGCTGAAGAAGCAGCTGAAGATTTAC
ATGAAGAAGGTCCAGGACTTAGAAGCTGCTCAGGCGTTGGCACAGAGTGACAGGAGACACCATGAACTCA
CAAGACAGGTCACAGTCCAACGAAAAGAGAAGGACTTCCAAGGCATGCTGGAGTACCACAAAGAGGACGA
AGCCCTCCTCATCCGGAACCTGGTGACAGACCTGAAGCCTCAGATGCTGTCGGGCACCGTGCCCTGTCTG
CCTGCATACATACTCTATATGTGCATCAGGCACGCGGATTACACCAACGATGACCTCAAGGTGCACTCGT
TGCTGAGCTCCACCATCAACGGCATTAAGAAAGTCCTCAAGAAGCACAATGATGACTTTGAGATGACGTC
ATTCTGGCTATCCAACACCTGCCGCTTCCTTCACTGTCTGAAGCAATACAGTGGTGATGAGGGTTTCATG
ACACAGAACACTGCGAAGCAGAATGAGCACTGTCTCAAGAACTTTGACCTCACTGAATACCGCCAGGTGC
TAAGCGACCTTTCCATTCAGATCTATCAGCAGCTCATTAAAATCGCCGAGGGCTTGCTGCAGCCTATGAT
AGTTTCTGCCATGTTGGAAAATGAGAGTATCCAGGGGCTGTCTGGTGTGAGACCAACTGGTTACCGGAAG
CGCTCCTCCAGCATGGTGGATGGAGAGAATTCGTATTGCCTGGAGGCCATCGTCCGCCAGATGAATTCTT
TCCATACAGTCCTGTGTGACCAGGGTCTGGACCCCGAGATTATCCTGCAGGTGTTCAAACAGCTCTTCTA
CATGATCAACGCTGTGACTCTTAACAACCTACTCCTGCGGAAAGACGCCTGCTCCTGGAGCACAGGCATG
CAACTCAGGTACAACATAAGTCAACTGGAAGAGTGGCTTCGGGGCAAAAACCTTCACCAAAGTGGAGCAG
TTCAGACCATGGAGCCCCTCATCCAGGCAGCCCAGCTCCTCCAGCTGAAGAAGAAAACCCACGAGGATGC
TGAGGCCATCTGCTCTCTGTGCACCTCCCTCAGCACCCAGCAGATTGTCAAAATTTTAAACCTCTACACT
CCCTTGAATGAATTTGAGGAACGGGTCACAGTGTCCTTCATACGAACAATCCAGGCTCAGCTACAAGAGA
GGAATGACCCTCAGCAGCTCCTGCTGGACTCCAAGCACGTGTTCCCAGTTCTGTTTCCATATAACCCATC
TGCTCTGACCATGGACTCGATCCACATCCCGGCCTGTCTCAACCTGGAGTTTCTCAATGAAGTCTGA

Translation (1818 aa):
MSYSELYTRYTRVWIPDPDEVWRSAELTKDYKEGDKSLQLRLEDDTILEYPVDVQNNQVPFLRNPDILVG
ENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYGQDVIYAYSGQNMGDMDPHIF
AVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGSASDTNIEEKVLASSPIMEAIGNAK
TTRNDNSSRFGKFIEIGFDKKYHIIGANMRTYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALT
CAEDFFYTAHGGNTTIEGVNDADDFEKTRQALTLLGVRDSHQISIFKIIASILHLGSVEIQSERDGDSCS
ISPQDEHLSNFCSLLGIEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARDALAKHIYAQLFSWIVEHI
NKALHTSLKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDF
YDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERHSNSQHFQKPRMSNTAFIVNHFADKVEYL
SDGFLEKNRDTVYEEQINILKASKFPLVADLFHDDKDSAPATNTAKNRSSSKINVRSSRPLIKVPNKEHK
KSVGYQFRTSLNLLMETLNATTPHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWT
YHDFFNRYRVLMKKRELTNTDKKNICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATI
MIQKSVRGWLQRVKYRRLRAATLSLQRFCRGYLARRLAEHLRRTRAAIVFQKQYRMLKARRAYRRVCRAT
VIIQSFTRAMFVRRNYRQVLMEHKATIIQKYARGWMARKRFLRERDAAIVIQCAFRRLKARQELKALKIE
ARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVTSSHAVEVEKLKKELAHYQQNQEADTSL
QLQEEVQSLRTELQKAHSERRVLEDAHNKENGELRKRVADLEHENALLKDEKEYLNNQILCQSKAESSQS
SVEENLLMKKELEEERSRYQNLVKEYSQLEQRYENLRDEQTPGHRKNPSNQSSLESDSNYPSISTSEIGD
TEDALQQVEEIGIEKAAMDMTVFLKLQKRVRELEQERKKLQAQLEKGQQDSKKGQVEQQNNGLDVDQDAD
IAYNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDSYSLLLNQLKLANEELEVRKEEVLIL
RTQIMNADQRRLSGKNMEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNRLLEAQLQAQSLEHEEEVEH
LKAQVEALKEEMDKQQQTFCQTLLLSPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNERKLKKQLKIY
MKKVQDLEAAQALAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPCL
PAYILYMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNDDFEMTSFWLSNTCRFLHCLKQYSGDEGFM
TQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVSAMLENESIQGLSGVRPTGYRK
RSSSMVDGENSYCLEAIVRQMNSFHTVLCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKDACSWSTGM
QLRYNISQLEEWLRGKNLHQSGAVQTMEPLIQAAQLLQLKKKTHEDAEAICSLCTSLSTQQIVKILNLYT
PLNEFEERVTVSFIRTIQAQLQERNDPQQLLLDSKHVFPVLFPYNPSALTMDSIHIPACLNLEFLNEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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