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Report for CCDS14950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14950.1 Public Mus musculus 1 Mstn 23 108 98 CCDS HistoryNCBI Gene:17700Re-query CCDS DB by CCDS ID:14950.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14950.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027269.6 ENSMUSP00000027269.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027269.6Link to Ensembl Protein Viewer:ENSMUSP00000027269.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000027269Re-query CCDS DB by Protein ID:ENSMUSP00000027269
Original member Current member NCBI NM_010834.3 NP_034964.1 Accepted alive Link to Nucleotide Sequence:NM_010834.3Link to Protein Sequence:NP_034964.1Re-query CCDS DB by Nucleotide ID:NM_010834Re-query CCDS DB by Protein ID:NP_034964Link to BLAST:NP_034964.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034964.1 376 O08689 376 100% 0 0

Chromosomal Locations for CCDS 14950.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 53061766 53062141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53063883 53064256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 53066251 53066631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGATGCAAAAACTGCAAATGTATGTTTATATTTACCTGTTCATGCTGATTGCTGCTGGCCCAGTGGATC
TAAATGAGGGCAGTGAGAGAGAAGAAAATGTGGAAAAAGAGGGGCTGTGTAATGCATGTGCGTGGAGACA
AAACACGAGGTACTCCAGAATAGAAGCCATAAAAATTCAAATCCTCAGTAAGCTGCGCCTGGAAACAGCT
CCTAACATCAGCAAAGATGCTATAAGACAACTTCTGCCAAGAGCGCCTCCACTCCGGGAACTGATCGATC
AGTACGACGTCCAGAGGGATGACAGCAGTGATGGCTCTTTGGAAGATGACGATTATCACGCTACCACGGA
AACAATCATTACCATGCCTACAGAGTCTGACTTTCTAATGCAAGCGGATGGCAAGCCCAAATGTTGCTTT
TTTAAATTTAGCTCTAAAATACAGTACAACAAAGTAGTAAAAGCCCAACTGTGGATATATCTCAGACCCG
TCAAGACTCCTACAACAGTGTTTGTGCAAATCCTGAGACTCATCAAACCCATGAAAGACGGTACAAGGTA
TACTGGAATCCGATCTCTGAAACTTGACATGAGCCCAGGCACTGGTATTTGGCAGAGTATTGATGTGAAG
ACAGTGTTGCAAAATTGGCTCAAACAGCCTGAATCCAACTTAGGCATTGAAATCAAAGCTTTGGATGAGA
ATGGCCATGATCTTGCTGTAACCTTCCCAGGACCAGGAGAAGATGGGCTGAATCCCTTTTTAGAAGTCAA
GGTGACAGACACACCCAAGAGGTCCCGGAGAGACTTTGGGCTTGACTGCGATGAGCACTCCACGGAATCC
CGGTGCTGCCGCTACCCCCTCACGGTCGATTTTGAAGCCTTTGGATGGGACTGGATTATCGCACCCAAAA
GATATAAGGCCAATTACTGCTCAGGAGAGTGTGAATTTGTGTTTTTACAAAAATATCCGCATACTCATCT
TGTGCACCAAGCAAACCCCAGAGGCTCAGCAGGCCCTTGCTGCACTCCGACAAAAATGTCTCCCATTAAT
ATGCTATATTTTAATGGCAAAGAACAAATAATATATGGGAAAATTCCAGCCATGGTAGTAGACCGCTGTG
GGTGCTCATGA

Translation (376 aa):
MMQKLQMYVYIYLFMLIAAGPVDLNEGSEREENVEKEGLCNACAWRQNTRYSRIEAIKIQILSKLRLETA
PNISKDAIRQLLPRAPPLRELIDQYDVQRDDSSDGSLEDDDYHATTETIITMPTESDFLMQADGKPKCCF
FKFSSKIQYNKVVKAQLWIYLRPVKTPTTVFVQILRLIKPMKDGTRYTGIRSLKLDMSPGTGIWQSIDVK
TVLQNWLKQPESNLGIEIKALDENGHDLAVTFPGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTES
RCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQKYPHTHLVHQANPRGSAGPCCTPTKMSPIN
MLYFNGKEQIIYGKIPAMVVDRCGCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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