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Report for CCDS23433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23433.1 Public Mus musculus 9 Mras 23 108 98 CCDS HistoryNCBI Gene:17532Re-query CCDS DB by CCDS ID:23433.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23433.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035045.14 ENSMUSP00000035045.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035045.14Link to Ensembl Protein Viewer:ENSMUSP00000035045.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000035045Re-query CCDS DB by Protein ID:ENSMUSP00000035045
Original member Current member EBI ENSMUST00000119472.7 ENSMUSP00000112407.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119472.7Link to Ensembl Protein Viewer:ENSMUSP00000112407.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119472Re-query CCDS DB by Protein ID:ENSMUSP00000112407
Original member Current member EBI ENSMUST00000122384.8 ENSMUSP00000113275.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122384.8Link to Ensembl Protein Viewer:ENSMUSP00000113275.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122384Re-query CCDS DB by Protein ID:ENSMUSP00000113275
Original member Current member NCBI NM_008624.3 NP_032650.1 Accepted alive Link to Nucleotide Sequence:NM_008624.3Link to Protein Sequence:NP_032650.1Re-query CCDS DB by Nucleotide ID:NM_008624Re-query CCDS DB by Protein ID:NP_032650Link to BLAST:NP_032650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032650.1 208 O08989 208 100% 0 0

Chromosomal Locations for CCDS 23433.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 99388405 99388504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99389733 99389812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99392946 99393045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99394469 99394622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 99411393 99411585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGCGACCAGCGCTGTTCCAAGTGAAAACCTTCCCACATATAAACTAGTAGTGGTGGGAGATGGTGGTG
TGGGCAAGAGTGCGCTCACTATTCAGTTTTTCCAGAAGATCTTTGTGCCTGACTACGACCCCACCATTGA
AGACTCCTACCTGAAGCATACAGAGATTGACAATCAGTGGGCCATCTTGGATGTTCTGGACACAGCCGGG
CAGGAGGAGTTCAGTGCCATGCGGGAACAATACATGCGCACAGGGGATGGCTTCCTCATTGTCTACTCCG
TCACCGACAAGGCCAGCTTCGAGCACGTGGACCGCTTCCACCAGCTCATTCTGCGTGTCAAGGACAGGGA
GTCATTCCCAATGATCCTCGTGGCCAACAAGGTGGATCTGATGCACCTAAGGAAAGTCACCAGGGACCAA
GGAAAAGAAATGGCAACCAAATACAATATCCCATATATAGAGACCAGTGCCAAGGACCCGCCTCTCAACG
TGGATAAAACCTTCCATGACCTAGTTAGAGTAATTAGGCAACAGGTTCCAGAGAAAAACCAGAAGAAGAA
AAAGAAGACAAAATGGCGAGGAGACAGGGCCACCGGCACTCACAAACTGCAGTGTGTCATCTTGTGA

Translation (208 aa):
MATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAG
QEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQ
GKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPEKNQKKKKKTKWRGDRATGTHKLQCVIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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