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Report for CCDS17360.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17360.1 Public Mus musculus 3 Mab21l1 23 108 98 CCDS HistoryNCBI Gene:17116Re-query CCDS DB by CCDS ID:17360.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17360.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075422.5 ENSMUSP00000074878.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075422.5Link to Ensembl Protein Viewer:ENSMUSP00000074878.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000075422Re-query CCDS DB by Protein ID:ENSMUSP00000074878
Original member Current member NCBI NM_010750.3 NP_034880.1 Accepted alive Link to Nucleotide Sequence:NM_010750.3Link to Protein Sequence:NP_034880.1Re-query CCDS DB by Nucleotide ID:NM_010750Re-query CCDS DB by Protein ID:NP_034880Link to BLAST:NP_034880.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034880.1 359 O70299 359 100% 0 0

Chromosomal Locations for CCDS 17360.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 55782994 55784073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGATCGCGGCCCAGGCCAAGCTGGTCTACCACCTGAATAAGTACTACAACGAGAAATGCCAGGCCAGGA
AAGCTGCCATCGCCAAAACCATCCGGGAAGTCTGCAAAGTGGTCTCCGACGTCCTGAAGGAGGTTGAAGT
GCAGGAACCGCGTTTCATCAGCTCCCTCAATGAGATGGACAACCGCTACGAGGGCCTGGAGGTTATCTCT
CCCACCGAGTTCGAGGTGGTACTCTATCTGAACCAGATGGGGGTGTTTAACTTCGTGGACGACGGCTCCC
TGCCTGGCTGTGCGGTGCTGAAACTGAGCGATGGGCGCAAGAGGAGCATGTCCCTCTGGGTGGAATTCAT
CACCGCCTCTGGCTACCTCTCGGCACGCAAAATCCGTTCCAGGTTTCAGACACTGGTGGCTCAGGCGGTG
GACAAGTGTAGCTACAGAGATGTAGTAAAGATGGTGGCTGACACGAGCGAAGTGAAACTGAGAATCCGAG
ATAGGTATGTGGTGCAGATCACCCCGGCCTTTAAATGCACCGGGATTTGGCCGCGGAGTGCTGCCCACTG
GCCGCTTCCCCACATCCCCTGGCCAGGACCCAACCGGGTGGCAGAGGTTAAGGCTGAAGGGTTCAATTTG
TTGTCCAAGGAGTGCCACTCCCTGGCCGGCAAGCAGAGTTCGGCTGAGAGCGATGCTTGGGTGCTGCAGT
TTGCAGAGGCCGAGAACAGACTGCAGATGGGGGGCTGCAGGAAGAAATGCCTCTCTATCCTGAAAACCCT
GCGTGATCGCCACCTGGAGTTGCCAGGCCAGCCCCTGAACAACTACCACATGAAGACTCTGGTGTCCTAC
GAGTGCGAGAAGCATCCTCGAGAGTCGGACTGGGACGAATCTTGCCTGGGCGATCGGCTGAACGGAATTC
TTCTGCAGCTCATCTCATGCCTGCAGTGCCGGCGGTGTCCCCATTACTTCTTACCGAACTTAGATCTGTT
TCAAGGCAAACCCCACTCGGCCTTGGAAAACGCTGCTAAACAAACGTGGCGACTGGCAAGAGAGATCCTG
ACCAACCCAAAAAGTTTGGAAAAACTTTAG

Translation (359 aa):
MIAAQAKLVYHLNKYYNEKCQARKAAIAKTIREVCKVVSDVLKEVEVQEPRFISSLNEMDNRYEGLEVIS
PTEFEVVLYLNQMGVFNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQAV
DKCSYRDVVKMVADTSEVKLRIRDRYVVQITPAFKCTGIWPRSAAHWPLPHIPWPGPNRVAEVKAEGFNL
LSKECHSLAGKQSSAESDAWVLQFAEAENRLQMGGCRKKCLSILKTLRDRHLELPGQPLNNYHMKTLVSY
ECEKHPRESDWDESCLGDRLNGILLQLISCLQCRRCPHYFLPNLDLFQGKPHSALENAAKQTWRLAREIL
TNPKSLEKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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