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Report for CCDS21189.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21189.1 Public Mus musculus 7 Klk1b8 23 108 98 CCDS HistoryNCBI Gene:16624Re-query CCDS DB by CCDS ID:21189.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21189.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072204.4 ENSMUSP00000072063.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072204.4Link to Ensembl Protein Viewer:ENSMUSP00000072063.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000072204Re-query CCDS DB by Protein ID:ENSMUSP00000072063
Original member Current member NCBI NM_008457.3 NP_032483.1 Accepted alive Link to Nucleotide Sequence:NM_008457.3Link to Protein Sequence:NP_032483.1Re-query CCDS DB by Nucleotide ID:NM_008457Re-query CCDS DB by Protein ID:NP_032483Link to BLAST:NP_032483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032483.1 261 P07628 261 100% 0 0

Chromosomal Locations for CCDS 21189.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43950691 43950736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43952692 43952851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43953851 43954137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43954234 43954370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43954740 43954895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGAGGTTCCTGATCCTGTTCCTAGCCCTGTCCCTAGGAGGGATTGATGCTGCACCTCCTCTCCAGTCTC
GGGTGGTTGGAGGATTTAACTGTGAGAAGAATTCCCAACCCTGGCAGGTGGCTGTGTATGACAACAAGGA
ACACATTTGTGGGGGAGTCCTGTTGGAACGCAACTGGGTTCTCACAGCTGCCCACTGCTATGTCGACCAG
TATGAGGTTTGGCTGGGCAAAAACAAGTTATTCCAAGAGGAACCCTCTGCTCAACACCGATTGGTCAGCA
AAAGCTTCCCTCACCCTGGCTTCAACATGAGCCTCCTGACACTCAAAGAGATACCTCCTGGGGCTGACTT
CAGCAATGACCTGATGCTGCTCCGCCTCAGCAAGCCTGCTGACATCACAGATGCTGTGAAGCCCATCACC
CTGCCCACGAAGGAGTCAAAACTGGGGAGCACATGCCTAGCCTCAGGCTGGGGCAGCATTACACCCACGA
AATGGCAAAAGCCAGATGATCTCCAGTGTGTGTTCCTCAAGCTCCTGCCTATTAAGAACTGTATAGAAAA
CCACAATGTGAAGGTGACAGATGTCATGCTGTGTGCAGGAGAGATGAGTGGAGGCAAAAACATTTGCAAG
GGTGACTCCGGAGGCCCATTGATCTGTGATAGTGTTCTCCAAGGTATCACATCAACAGGCCCTATACCAT
GCGGTAAACCTGGTGTACCAGCCATGTACACCAACCTTATTAAGTTCAACTCCTGGATAAAAGATACTAT
GACGAAAAATTCCTGA

Translation (261 aa):
MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQ
YEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPIT
LPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICK
GDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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