NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS24239.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24239.1 Public Mus musculus 10 Inhbe 23 108 98 CCDS HistoryNCBI Gene:16326Re-query CCDS DB by CCDS ID:24239.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24239.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059718.5 ENSMUSP00000053977.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059718.5Link to Ensembl Protein Viewer:ENSMUSP00000053977.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000059718Re-query CCDS DB by Protein ID:ENSMUSP00000053977
Original member Current member NCBI NM_008382.3 NP_032408.2 Accepted alive Link to Nucleotide Sequence:NM_008382.3Link to Protein Sequence:NP_032408.2Re-query CCDS DB by Nucleotide ID:NM_008382Re-query CCDS DB by Protein ID:NP_032408Link to BLAST:NP_032408.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032408.2 350 O08717 350 100% 0 0

Chromosomal Locations for CCDS 24239.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 127350257 127351011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 127351248 127351545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGAAGCTTCCAAAAGCCCAGCTCTGGCTAATACTGCTGTGGGCATTGGTGTGGGTGCAGAGTACAAGAT
CTGCGTGCCCGTCCTGTGGGGGCCCAACACTGGCACCCCAAGGAGAACGCGCTCTGGTCCTGGAGCTAGC
CAAGCAGCAAATCCTGGAGGGACTGCACCTAACCAGCCGTCCCAGAATAACTCGGCCTCTGCCCCAGGCA
GCACTGACCAGAGCCCTCCGGAGACTGCAGCCCAAGAGCATGGTCCCTGGCAACCGAGAGAAAGTCATCA
GCTTTGCTACCATCATAGACAAATCCACTTCAACCTACCGCTCCATGCTCACCTTCCAGCTGTCCCCTCT
TTGGTCCCACCACCTGTACCATGCCCGCCTCTGGCTGCATGTGCCTCCCTCTTTTCCGGGCACTCTGTAC
CTGAGGATCTTCCGTTGCGGCACCACTAGGTGCCGAGGATTCCGCACCTTCCTAGCTGAGCACCAAACCA
CTTCCTCTGGCTGGCACGCCCTGACTCTGCCCTCTAGCGGCTTGCGGAGTGAGGACTCTGGCGTCGTGAA
ACTCCAACTGGAATTTAGACCCCTGGACCTTAACAGCACCGCTGCGGGACTGCCACGGCTGCTCTTGGAC
ACAGCGGGACAGCAACGTCCCTTCTTGGAACTTAAGATCCGAGCTAATGAACCTGGAGCAGGTCGGGCCA
GGAGGAGGACTCCCACCTGTGAGCCTGAGACCCCCTTATGTTGTAGGCGAGACCACTATGTAGACTTCCA
GGAGCTGGGGTGGCGGGATTGGATCCTGCAGCCGGAGGGATACCAGCTGAATTACTGCAGTGGGCAGTGC
CCGCCCCACCTGGCTGGCAGTCCTGGCATTGCTGCCTCCTTCCATTCTGCCGTCTTTAGCCTCCTCAAAG
CCAACAACCCTTGGCCTGCGGGTTCTTCCTGCTGTGTCCCCACTGCACGAAGGCCTCTCTCTCTCCTCTA
CCTTGACCATAATGGCAATGTGGTCAAGACCGATGTGCCAGACATGGTAGTAGAGGCCTGTGGCTGCAGC
TAG

Translation (350 aa):
MKLPKAQLWLILLWALVWVQSTRSACPSCGGPTLAPQGERALVLELAKQQILEGLHLTSRPRITRPLPQA
ALTRALRRLQPKSMVPGNREKVISFATIIDKSTSTYRSMLTFQLSPLWSHHLYHARLWLHVPPSFPGTLY
LRIFRCGTTRCRGFRTFLAEHQTTSSGWHALTLPSSGLRSEDSGVVKLQLEFRPLDLNSTAAGLPRLLLD
TAGQQRPFLELKIRANEPGAGRARRRTPTCEPETPLCCRRDHYVDFQELGWRDWILQPEGYQLNYCSGQC
PPHLAGSPGIAASFHSAVFSLLKANNPWPAGSSCCVPTARRPLSLLYLDHNGNVVKTDVPDMVVEACGCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH